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Protein
Submitted name:

Resistance complex protein I2C-2

Gene

I2C-2

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Plant defenseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Resistance complex protein I2C-2Imported
Gene namesi
Name:I2C-2Imported
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon

Structurei

3D structure databases

ProteinModelPortaliO24016.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini174 – 454281NB-ARCInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili70 – 10132Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the disease resistance NB-LRR family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 4 hits.
InterProiIPR032675. L_dom-like.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00931. NB-ARC. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 3 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 3 hits.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

O24016-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEIGLAVGGA FLSSALNVLF DRLAPNGDLL NMFRKHKDHV KLLKKLKMTL
60 70 80 90 100
RGIQIVLSDA ENKQASNPSV RDWLNELRDA VDSAENLIEE VNYEALRLKV
110 120 130 140 150
EGQHQNFSET SNQQVSDEFF LNIKDKLEDT IETLKDLQEQ IGLLGLKEYF
160 170 180 190 200
DSTKLETRTP STSLIDEPDI FGRQSEIEDL IDRLLSEGAS GKNLTVVPIV
210 220 230 240 250
GMGGLGKTTL AKAVYNDESV KNHFDLKAWF CVSEAYNAFR ITKGLLQEIG
260 270 280 290 300
SIDLVDDNLN QLQVKLKERL KEKKFLIVLD DVWNDNYNEW DELRNVFVQG
310 320 330 340 350
DIGSKIIVTT RKDSVALMMG NEQISMGNLS TEASWSLFQR HAFENMDPMG
360 370 380 390 400
HSELEEVGRQ IAAKCKGLPL ALKTLAGMLR SKSEVEEWKC ILRSEIWELR
410 420 430 440 450
DNDILPALML SYNDLPAHLK RCFSFCAIFP KDYPFRKEQV IHLWIANGLV
460 470 480 490 500
PVEDEIIQDL GNQFFLELSS RSLFERVPNP SEGNIKELFL MHDLVNDLAQ
510 520 530 540 550
LASSKLCIRL EESQGSHMLE QCRHLSYSMG YDGGFEKLTP LYKLEQLRTL
560 570 580 590 600
LPTCSSVNYF YNPLTKRVLH NILPTLRSLR ALSLSHYKME ELPNDLFIKL
610 620 630 640 650
KLLRFLDISR TNIKRLPDSI CVLYNLETLL LSSCKLEELP LQMEKLINLR
660 670 680 690 700
HLDISNTWHL KMPLHLSRLK SLQVLVGAKF LVGVWRMEDL GEAQNLYGSL
710 720 730 740 750
SVVKLENVVD RREAVKPKMR EKNHVEQLSL EWSESISADN SQTERDILDE
760 770 780 790 800
LRPHKNIQEV KIIGYRGTNF PNWVADPLFL KLVKLSLRNC KDCYSLPALG
810 820 830 840 850
QLPCLKFLSV KGMHGIRVVT EEFYGRLSSK KPFNCLEKLE FEDMTEWKQW
860 870 880 890 900
HALGIGEFPT LEKLSIINCP ELSLEIPIQF SSLKRFRVFG CPVVFYDAQV
910 920 930 940 950
LRSQLEGMKQ IEEIYIRDCN SVTSFPFSIL PTTLKTIDIS GCPKLKLEAP
960 970 980 990 1000
VCEMSMFLEE FSVEECGCVS PEFLPTAREL RIGNCHNVRF LIPTATETLH
1010 1020 1030 1040 1050
IRNCENVEKL SMACGGAAQL TSLDISGCKK LKCLPELLPS LKELQLTNCP
1060 1070 1080 1090 1100
EIEGELPFNL QKLYIRDCKK LVNGRKEWHL QRLTKLVIYH DGSDEDIEHW
1110 1120 1130 1140 1150
ELPCSITRLE VFNLITLSSQ HLKSLTSLQY LCIDGNLSPI QSQGQISSFS
1160 1170 1180 1190 1200
HLTSLQTLQI WNFHNLQSLS ESALPSSLSQ LEIFHCPNLQ SLPLNGMPSS
1210 1220 1230 1240
LSKLLISGCP LLTPLLEFDK GEYWPQIAHI PTILIDWEYI
Length:1,240
Mass (Da):141,525
Last modified:January 1, 1998 - v1
Checksum:iD74EE158C406C102
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF004879 Genomic DNA. Translation: AAB63275.1.
PIRiT06404.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF004879 Genomic DNA. Translation: AAB63275.1.
PIRiT06404.

3D structure databases

ProteinModelPortaliO24016.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 4 hits.
InterProiIPR032675. L_dom-like.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00931. NB-ARC. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 3 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 3 hits.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The I2C family from the wilt disease resistance locus I2 belongs to the nucleotide binding, leucine-rich repeat superfamily of plant resistance genes."
    Ori N., Eshed Y., Paran I., Presting G., Aviv D., Tanksley S., Zamir D., Fluhr R.
    Plant Cell 9:521-532(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO24016_SOLLC
AccessioniPrimary (citable) accession number: O24016
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: May 11, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.