Skip Header

Contribute Send feedback
Read comments (?) or add your own

O23972 (O23972_HOLLA) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Group V allergen EMBL CAB10765.1
Gene names
Name:Hol l 5 EMBL CAB10765.1
OrganismHolcus lanatus (Velvet grass) (Nothoholcus lanatus) EMBL CAB10765.1
Taxonomic identifier29679 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Pooideae › Poeae › Holcinae › Holcus

Protein attributes

Sequence length264 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological_processtype I hypersensitivity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CAB10765.1

Sequences

Sequence LengthMass (Da)Tools
O23972 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 3F9409429DC9337F

FASTA26426,217
        10         20         30         40         50         60 
ADAGYTPAAP AAAGAGGKAT TDEQKLLEDV NAGFKTAVAA AANVPPADKY KTFEAAFTAS 

        70         80         90        100        110        120 
SKASIAAAAT KAPGLIPQLN AATNTAYAAA QGATPEAKYD AFVTTLTEAL RVIAGALEVH 

       130        140        150        160        170        180 
AVKPATEEVG AAKIPAGELQ IVDKIDAAFR IAATAANAAP VNDKFTVFEG AFNKAIKEST 

       190        200        210        220        230        240 
GGAYEAYKFI PSLETAVKQA YAATVATAPE VKYTVFETAL KKAITAMSEA QKEAKPVAAA 

       250        260 
TGAATAAAGV AAGAATAAAG GYKV

« Hide

References

[1]"Molecular and immunological characterization of group V allergen isoforms from velvet grass pollen (Holcus lanatus)."
Schramm G., Bufe A., Petersen A., Schlaak M., Becker W.M.
Eur. J. Biochem. 252:200-206(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Holcus lanatus EMBL CAB10765.1.
Tissue: Inflorescence EMBL CAB10765.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		Z97874 mRNA. Translation: CAB10765.1.
PIRT09449.

3D structure databases

HSSPHSSP built from PDB template 1L3P based on UniProtKB Q40963.
ProteinModelPortalO23972.
ModBaseSearch...

Protein family/group databases

Allergome3318. Hol l 5.0101.
409. Hol l 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GrameneO23972.

Family and domain databases

Gene3D1.20.120.320. 2 hits.
InterProIPR001778. POA_allergen.
IPR002914. POA_allergen_N.
[Graphical view]
PfamPF01620. Pollen_allerg_2. 2 hits.
[Graphical view]
PRINTSPR00833. POAALLERGEN.
SUPFAMSSF81736. POA_allergen_N. 2 hits.
ProtoNetSearch...

Entry information

Entry nameO23972_HOLLA
AccessionPrimary (citable) accession number: O23972
Entry history
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: April 3, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info