O23954 (O23954_GOSHI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Endo-1,4-beta-glucanase EMBL BAA21111.1
Organism	Gossypium hirsutum (Upland cotton) (Gossypium mexicanum) EMBL BAA21111.1
Taxonomic identifier	3635 [NCBI]
Taxonomic lineage	Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Malvales › Malvaceae › Malvoideae › Gossypium

Protein attributes

Sequence length	324 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAA21111.1

Sequences

	Sequence		Length	Mass (Da)
	O23954 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 4DBFE522F736AEA0	FASTA	324	35,625
	10 20 30 40 50 60 PVFEKYRQKA EYFMCSLIGK GSRNIQKTPG GLIYRQRWNN MQFVTSASFL ATVYSDYLTS 70 80 90 100 110 120 YRGSLKCAAG NVAPSELLSF AKSQVDYLLG DNPRATSYMV GYGNNYPRQV HHRGSSIVSI 130 140 150 160 170 180 KVNPKFVACR QGYATWYTRK ASDPNVLTGA LVGGPDAYDN FADERDNYEQ TEPATYNNAP 190 200 210 220 230 240 LLGILARLAG GHGGYNQLLP VVAPVPNPVI AKPKPAPKPK RTPTPASSSS PITINQKMTT 250 260 270 280 290 300 SWNHKGKTYY RYSTVVTNKS YKTLKALKLS ISKLYGPIWG LTKSGNSYGF PEWLNSLPAG 310 320 KSLEFVYIHA ASPADVSVSS YNIA

References

[1]

"Changes in levels of mRNAs for cell wall-related enzymes in growing cotton fiber cells." Shimizu Y., Aotsuka S., Hasegawa O., Kawada T., Sakuno T., Sakai F., Hayashi T. Plant Cell Physiol. 38:375-378(1997) [PubMed: 9150611] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Coker312 EMBL BAA21111.1. Tissue: Cotton fiber EMBL BAA21111.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	D88417 mRNA. Translation: BAA21111.1.
PIR	T09873.
3D structure databases
HSSP	HSSP built from PDB template 1IA6 based on UniProtKB Q9EYQ2.
ProteinModelPortal	O23954.
ModBase	Search...
Protein family/group databases
CAZy	CBM49. Carbohydrate-Binding Module Family 49. GH9. Glycoside Hydrolase Family 9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR019028. CBM_49. IPR001701. Glyco_hydro_9. IPR018221. Glyco_hydro_9_AS. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
Pfam	PF09478. CBM49. 1 hit. PF00759. Glyco_hydro_9. 1 hit. [Graphical view]
SMART	SM01063. CBM49. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
PROSITE	PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit. PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O23954_GOSHI

Accession

Primary (citable) accession number: O23954

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	January 25, 2012
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)