Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Polyprotein

Gene
N/A
Organism
Oryza australiensis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
PolyproteinImported
OrganismiOryza australiensisImported
Taxonomic identifieri4532 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza

Structurei

3D structure databases

ProteinModelPortaliO23864.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini255 – 270CCHC-typeInterPro annotationAdd BLAST16
Domaini480 – 656Integrase catalyticInterPro annotationAdd BLAST177

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
4.10.60.10. 1 hit.
InterProiIPR025724. GAG-pre-integrase_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF13976. gag_pre-integrs. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O23864-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAANTTPSTF NLRSILEKEK LNGTNFMDWY RNLRIVLKQE RKEYVLEVPY
60 70 80 90 100
PEELPNNATA TARRGFEKHT NDALDISCLM LATMSPELQK QYESSDAHTT
110 120 130 140 150
IQGLRGMFEN QARDERFNTS KSLFACRLVE GNPVSPHVIK MIGYIESLEK
160 170 180 190 200
LGFPLSQELA TDVILQSLPP SFEPFILNYH MNNMDRTLAE LHGMLKTVEE
210 220 230 240 250
SIQKNGHHVM MMQNAKRKPP VKKLCTKRKL TPDEIASASN AKKGKKGSAA
260 270 280 290 300
SDAVCFYCKE TGHWKRNCKK YMEDLKKKQS TTSASGINVI DINLATSPTD
310 320 330 340 350
SWVFDTGSVA HSCKSLQGMR RSRGLRRGEV NLRVGNGASV ATVAVGTVPL
360 370 380 390 400
HLPSGLVLEL NNCYCVPTLC QNVISASCLQ AEGYDFRSMN NGCSIYLRDM
410 420 430 440 450
FYFHAPLVNG LYVLNLEASP IYNINTERQL SNDINPTFIW HCRLGHINKK
460 470 480 490 500
RMEKLHKDGL LHSFDFESFE TCESCLLGKM TKAPFTGHSE RASDLLALVH
510 520 530 540 550
TDVCGPMSST ARGGYQYFIT FTDDFSRYGY IYLMRHKSES FEKFKEFQNE
560 570 580 590 600
VQNHLGKTIK FLRSDRGGEY VSQEFGNHLK DCGIVPQLTP PGTPQWNGVS
610 620 630 640 650
ERRNRTLLDM VRSMMSQSDL PLSFWGYALE TAALTLNRVP SKSVEKTPYE
660 670 680 690 700
IWTGQPPSLS FLKIWGCEAY VKRLQSDKLT PKSDKCFVVG YPKETKGYYF
710 720 730 740 750
YNREQAKVFV ARHGVFLEKE FLSRRVSGIR VHLEEVQETP ETVSATTEPQ
760 770 780 790 800
QEDQSVAPPV VDTPAPRRSE RSRRAPDRYT GAEQRDILLL DNDEPKTYEE
810 820 830 840 850
AMVGHDSNKW LGAMKSEIES MYDNQVWNLV DPPDGVKTIE CKWLFKKKAD
860 870 880 890 900
MDGNVHIYKA RLVAKGFKQI QGVDYDETFS PVAMLKSIRI ILAIAAYFDY
910 920 930 940 950
EIWQMDVKTA FLNGNLSEDV YMIQPQGFVD PESPGKICKL QKSIYGLKQA
960 970 980 990 1000
SRSWNIRFDE VIKGFGFIKN EEEACVYKKV SGSAIVFLIL YVDDILLIGN
1010 1020 1030 1040 1050
DIPMLESVKS SLKNSFSMKD LGEAAYILGI RIYRDRSKRL IGLSQSTYID
1060 1070 1080 1090 1100
KVLKRFNMHD SKKGFLPMSH GINLSKNQCP QTHDERNKMG MVPYASAIGS
1110 1120 1130 1140 1150
IMYAMLCTRP DVSYALSATS RYQSDPGEGH WTAVKNILKY LRRTKDMFLV
1160 1170 1180 1190 1200
YGGEEDLVVS GYTDASFQTD KDDYRSQSGF VFCLNGGAVS WKSSKQDTVA
1210 1220 1230 1240 1250
DSTTEAEYIA ASEAAKEAVW IKKFVSELGV MTSTTGPMSL YCDNSGAIAQ
1260 1270 1280 1290 1300
AKEPRSHQKS KHILRRYHLI REIVDRGDVK ICKVHTDLNI ADPLTKPLPQ
1310
PKHEAHTRAM GIRYLHD
Length:1,317
Mass (Da):149,074
Last modified:January 1, 1998 - v1
Checksum:iC16B16EDB40A751E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D85597 Genomic DNA. Translation: BAA22288.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D85597 Genomic DNA. Translation: BAA22288.1.

3D structure databases

ProteinModelPortaliO23864.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
4.10.60.10. 1 hit.
InterProiIPR025724. GAG-pre-integrase_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF13976. gag_pre-integrs. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO23864_9ORYZ
AccessioniPrimary (citable) accession number: O23864
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.