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Protein

Expansin-like B1

Gene

EXLB1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Expansin-like B1
Short name:
At-EXPR1
Short name:
AtEXLB1
Short name:
AtEXPR1
Alternative name(s):
Ath-ExpBeta-3.1
Gene namesi
Name:EXLB1
Synonyms:EXPR1
Ordered Locus Names:At4g17030
ORF Names:dl4545c
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G17030
TAIRilocus:2130444 AT4G17030

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_000000871525 – 250Expansin-like B1Add BLAST226

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi72N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiO23547

Expressioni

Gene expression databases

ExpressionAtlasiO23547 baseline and differential
GenevisibleiO23547 AT

Interactioni

Protein-protein interaction databases

BioGridi12704, 2 interactors
IntActiO23547, 2 interactors
STRINGi3702.AT4G17030.1

Structurei

3D structure databases

ProteinModelPortaliO23547
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 149Expansin-like EG45PROSITE-ProRule annotationAdd BLAST105
Domaini163 – 245Expansin-like CBDPROSITE-ProRule annotationAdd BLAST83

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IG96 Eukaryota
ENOG41115SZ LUCA
HOGENOMiHOG000220794
InParanoidiO23547
OMAiYDSNILL
OrthoDBiEOG09360I7M
PhylomeDBiO23547

Family and domain databases

Gene3Di2.40.40.10, 1 hit
2.60.40.760, 1 hit
InterProiView protein in InterPro
IPR007118 Expan_Lol_pI
IPR007112 Expansin/allergen_DPBB_dom
IPR007117 Expansin_CBD
IPR036749 Expansin_CBD_sf
IPR005795 LolPI
IPR009009 RlpA-like_DPBB
IPR036908 RlpA-like_sf
PfamiView protein in Pfam
PF03330 DPBB_1, 1 hit
PF01357 Pollen_allerg_1, 1 hit
PRINTSiPR01225 EXPANSNFAMLY
PR00829 LOLP1ALLERGN
SUPFAMiSSF49590 SSF49590, 1 hit
SSF50685 SSF50685, 1 hit
PROSITEiView protein in PROSITE
PS50843 EXPANSIN_CBD, 1 hit
PS50842 EXPANSIN_EG45, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O23547-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY
60 70 80 90 100
GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
110 120 130 140 150
DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN
160 170 180 190 200
LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
210 220 230 240 250
VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT
Length:250
Mass (Da):27,934
Last modified:August 2, 2002 - v2
Checksum:i62037805251ACC4A
GO

Sequence cautioni

The sequence CAB10483 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence CAB80974 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z97342 Genomic DNA Translation: CAB10483.1 Sequence problems.
AL161545 Genomic DNA Translation: CAB80974.1 Sequence problems.
CP002687 Genomic DNA Translation: AEE83841.1
BT005867 mRNA Translation: AAO64802.1
RefSeqiNP_193436.2, NM_117807.3
UniGeneiAt.33028

Genome annotation databases

EnsemblPlantsiAT4G17030.1; AT4G17030.1; AT4G17030
GeneIDi827411
GrameneiAT4G17030.1; AT4G17030.1; AT4G17030
KEGGiath:AT4G17030

Similar proteinsi

Entry informationi

Entry nameiEXLB1_ARATH
AccessioniPrimary (citable) accession number: O23547
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 5, 2002
Last sequence update: August 2, 2002
Last modified: April 25, 2018
This is version 132 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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