Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

60S ribosomal protein L15-1

Gene

RPL15A

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-ATH-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-ATH-72689. Formation of a pool of free 40S subunits.
R-ATH-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-ATH-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-ATH-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L15-1
Gene namesi
Name:RPL15A
Ordered Locus Names:At4g16720
ORF Names:dl4385c, FCAALL.416
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRilocus:2129081. AT4G16720.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: TAIR
  • cytosolic large ribosomal subunit Source: TAIR
  • cytosolic ribosome Source: TAIR
  • plasma membrane Source: TAIR
  • vacuolar membrane Source: TAIR

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001275561 – 20460S ribosomal protein L15-1Add BLAST204

Proteomic databases

PaxDbiO23515.
PRIDEiO23515.

PTM databases

iPTMnetiO23515.

Expressioni

Gene expression databases

ExpressionAtlasiO23515. baseline and differential.
GenevisibleiO23515. AT.

Interactioni

Protein-protein interaction databases

BioGridi12668. 2 interactors.
STRINGi3702.AT4G16720.1.

Structurei

3D structure databases

ProteinModelPortaliO23515.
SMRiO23515.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1678. Eukaryota.
COG1632. LUCA.
HOGENOMiHOG000229584.
InParanoidiO23515.
KOiK02877.
OMAiQRKKQSD.
OrthoDBiEOG09360NW9.
PhylomeDBiO23515.

Family and domain databases

Gene3Di3.40.1120.10. 1 hit.
InterProiView protein in InterPro
IPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR020925. Ribosomal_L15e_CS.
IPR012678. Ribosomal_L23/L15e_core_dom.
PANTHERiPTHR11847. PTHR11847. 1 hit.
PfamiView protein in Pfam
PF00827. Ribosomal_L15e. 1 hit.
SMARTiView protein in SMART
SM01384. Ribosomal_L15e. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiView protein in PROSITE
PS01194. RIBOSOMAL_L15E. 1 hit.

Sequencei

Sequence statusi: Complete.

O23515-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGAYKYVSEL WRKKQSDVMR FLQRVRCWEY RQQPSIVRLV RPTRPDKARR
60 70 80 90 100
LGYKAKQGFV VYRVRVRRGG RKRPVPKGIV YGKPTNQGVT QLKFQRSKRS
110 120 130 140 150
VAEERAGRKL GGLRVVNSYW LNEDSTYKYY EIILVDPAHN AVRNDPRINW
160 170 180 190 200
ICNPVHKHRE LRGLTSEGKK NRGLRGKGHN NHKNRPSRRA TWKKNNSLSL

RRYR
Length:204
Mass (Da):24,239
Last modified:January 1, 1998 - v1
Checksum:iEBD8D4BE0D1B97E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z97341 Genomic DNA. Translation: CAB10447.1.
AL161544 Genomic DNA. Translation: CAB78714.1.
CP002687 Genomic DNA. Translation: AEE83791.1.
AF370352 mRNA. Translation: AAK44167.1.
AY058841 mRNA. Translation: AAL24229.1.
AY075603 mRNA. Translation: AAL91619.1.
AY133797 mRNA. Translation: AAM91731.1.
AY143818 mRNA. Translation: AAN28757.1.
AY086316 mRNA. Translation: AAM64387.1.
PIRiE71434.
RefSeqiNP_193405.1. NM_117773.4.
UniGeneiAt.21296.
At.74971.

Genome annotation databases

EnsemblPlantsiAT4G16720.1; AT4G16720.1; AT4G16720.
GeneIDi827375.
GrameneiAT4G16720.1; AT4G16720.1; AT4G16720.
KEGGiath:AT4G16720.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z97341 Genomic DNA. Translation: CAB10447.1.
AL161544 Genomic DNA. Translation: CAB78714.1.
CP002687 Genomic DNA. Translation: AEE83791.1.
AF370352 mRNA. Translation: AAK44167.1.
AY058841 mRNA. Translation: AAL24229.1.
AY075603 mRNA. Translation: AAL91619.1.
AY133797 mRNA. Translation: AAM91731.1.
AY143818 mRNA. Translation: AAN28757.1.
AY086316 mRNA. Translation: AAM64387.1.
PIRiE71434.
RefSeqiNP_193405.1. NM_117773.4.
UniGeneiAt.21296.
At.74971.

3D structure databases

ProteinModelPortaliO23515.
SMRiO23515.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi12668. 2 interactors.
STRINGi3702.AT4G16720.1.

PTM databases

iPTMnetiO23515.

Proteomic databases

PaxDbiO23515.
PRIDEiO23515.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G16720.1; AT4G16720.1; AT4G16720.
GeneIDi827375.
GrameneiAT4G16720.1; AT4G16720.1; AT4G16720.
KEGGiath:AT4G16720.

Organism-specific databases

AraportiAT4G16720.
TAIRilocus:2129081. AT4G16720.

Phylogenomic databases

eggNOGiKOG1678. Eukaryota.
COG1632. LUCA.
HOGENOMiHOG000229584.
InParanoidiO23515.
KOiK02877.
OMAiQRKKQSD.
OrthoDBiEOG09360NW9.
PhylomeDBiO23515.

Enzyme and pathway databases

ReactomeiR-ATH-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-ATH-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-ATH-72689. Formation of a pool of free 40S subunits.
R-ATH-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-ATH-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-ATH-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiPR:O23515.

Gene expression databases

ExpressionAtlasiO23515. baseline and differential.
GenevisibleiO23515. AT.

Family and domain databases

Gene3Di3.40.1120.10. 1 hit.
InterProiView protein in InterPro
IPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR020925. Ribosomal_L15e_CS.
IPR012678. Ribosomal_L23/L15e_core_dom.
PANTHERiPTHR11847. PTHR11847. 1 hit.
PfamiView protein in Pfam
PF00827. Ribosomal_L15e. 1 hit.
SMARTiView protein in SMART
SM01384. Ribosomal_L15e. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiView protein in PROSITE
PS01194. RIBOSOMAL_L15E. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRL151_ARATH
AccessioniPrimary (citable) accession number: O23515
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: January 1, 1998
Last modified: April 12, 2017
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.