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Protein
Submitted name:

Reverse transcriptase like protein

Gene

dl4045w

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Nucleotidyltransferase, RNA-directed DNA polymeraseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Reverse transcriptase like proteinImported
Gene namesi
Name:dl4045wImported
Ordered Locus Names:At4g16010Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Structurei

3D structure databases

ProteinModelPortaliO23450.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini382 – 442gag_pre-integrsInterPro annotationAdd BLAST61
Domaini835 – 1013Reverse transcriptase Ty1/copia-typeInterPro annotationAdd BLAST179
Domaini1056 – 1098C1_2InterPro annotationAdd BLAST43
Domaini1282 – 1342gag_pre-integrsInterPro annotationAdd BLAST61
Domaini1735 – 1941Reverse transcriptase Ty1/copia-typeInterPro annotationAdd BLAST207

Family and domain databases

Gene3Di3.30.420.10. 2 hits.
InterProiIPR004146. DC1.
IPR025724. GAG-pre-integrase_dom.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
IPR029472. UBN2_3.
[Graphical view]
PfamiPF03107. C1_2. 1 hit.
PF13976. gag_pre-integrs. 2 hits.
PF14244. Retrotran_gag_3. 1 hit.
PF07727. RVT_2. 2 hits.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 2 hits.

Sequencei

Sequence statusi: Complete.

O23450-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSELMERRS MELYTVPQLN ISNCVTVTLT QQNYILWKSQ FESFLSGQGL
60 70 80 90 100
LGFVTGSISA PSPTIPVPDI NGVTTDRPNP EFDVWFKTDK VVKSWLLGSF
110 120 130 140 150
AEDILSVVVN YVTAHELQRR LQTLEKKDKP MQVYLKELQT IYEQLASVGS
160 170 180 190 200
PVPEKMKIFA ALNGLGREYE PIKTSIEGSI DIPPTPKLDE IMPRLNGYDD
210 220 230 240 250
RLQAYAANSD VSPHLAFNTV QANSVFYTNR GRGQGNRRFG GSRGQERPTC
260 270 280 290 300
QICGKHGHHA LNCWHRFDNS YQLDVLPQAL PATQITDITD HSGSEWVTDS
310 320 330 340 350
AATAHITNSP RHLQQTKSYA GSDSVMVGNG NFLPITHTGS TSIGSTSVTK
360 370 380 390 400
DYPCIFEFDC DEVRVRDKET KKLLLQGSNR DGLYVLDEPK LLVFYSSRQV
410 420 430 440 450
AASDEVWHRR LGHPNPHVLQ QLSSTKSILI NKHSKAICEA CQSERIHCDL
460 470 480 490 500
WGPSPVMSVQ GFRYYVIFID NYSRYCWFYP LKLKSDFYTI FAKFQALVQN
510 520 530 540 550
QLQSKISIFQ CHGGGEFTSK VPQKHWVEAF YTTNFLSNLL PHTALTDAKS
560 570 580 590 600
PFELLNKKKP DYQALRIFGC ACFPTLRDYA QHKFDPKSLK CVFLGYNEKY
610 620 630 640 650
KGYRCLLPTT GRVYISRHVI FDEHSFPFSD TYMHLQPTGV TPLLSAWQQS
660 670 680 690 700
FMPQTTASST ASATATSPFN AAEIQVSPVI TSNNNTGASV LENGSSQLPI
710 720 730 740 750
QNSSVLSTVA SEESSECTES INLLPIGNSS SSLANRTDNA DTSPLQEAAT
760 770 780 790 800
ETNSSTVQEA AESTTSSTMQ EPASNQSTHP MITRSKKGIT KPNPRYGLLT
810 820 830 840 850
HKVKYAEPKT VTEALKHPGW TAAMHEEYDN CTEAQTWSLV PYTSDMNVLG
860 870 880 890 900
SKWVFRTKLN ADGSLDKLKA RLVAKGFDQE EGIDYLETYS HVVRSATVRM
910 920 930 940 950
VLHVATVMDW EVKQMDVKNA FLHGDLTETV YMLQPAGFVN KEKPTHVCHL
960 970 980 990 1000
HKALYGLKQA PRAWFDKFSN YLLEFGFNCS IKDPSLFIYL KGNDLILLLL
1010 1020 1030 1040 1050
YVDDMVLTEN EEAYGNCKLC RGNLPKIYYY CLICDFSIDL ICAKKEVMEI
1060 1070 1080 1090 1100
IEGPKAHEHP LFLLPKMTMF TCHLCGLQDD RFPYACNLCN LSFHKDCAES
1110 1120 1130 1140 1150
TPEMKYSCHP KHILKRLTRV PSVDINCAKN PLPSTIVHLK AHEHLLTLMP
1160 1170 1180 1190 1200
QRNFVCDACG MDDDPNPYIV LYIKIVPQAL PATQITDITD HSGSEWVTDS
1210 1220 1230 1240 1250
AATAHITNSP RHLQQTKSYA GSDSVMVGNG NFLPITHTGS TSIGSTSVTK
1260 1270 1280 1290 1300
DYPCIFEFDC DEVRVRDKET KKLLLQGSNR DGLYVLDEPK LLVFYSSRQV
1310 1320 1330 1340 1350
AASDEVWHRR LGHPNPHVLQ QLSSTKSILI NKHSKAICEA CQSERIHCDL
1360 1370 1380 1390 1400
WGPSPVMSVQ GFRYYVIFID NYSRYCWFYP LKLKSDFYTI FAKFQALVQN
1410 1420 1430 1440 1450
QLQSKISIFQ CHGGGEFTSK VPQKHWVEAF YTTNFLSNLL PHTALTDAKS
1460 1470 1480 1490 1500
PFELLNKKKP DYQALRIFGC ACFPTLRDYA QHKFDPKSLK CVFLGYNEKY
1510 1520 1530 1540 1550
KGYRCLLPTT GRVYISRHVI FDEHSFPFSD TYMHLQPTGV TPLLSAWQQS
1560 1570 1580 1590 1600
FMPQTTASST ASATATSPFN AAEIQVSPVI TSNNNTGASV LENGSSQLPI
1610 1620 1630 1640 1650
QNSSVLSTVA SEESSECTES INLLPIGNSS SSLANRTDNA DTSPLQEAAT
1660 1670 1680 1690 1700
ETNSSTVQEA AESTTSSTMQ EPASNQSTHP MITRSKKGIT KPNPRYGLLT
1710 1720 1730 1740 1750
HKVKYAEPKT VTEALKHPGW TAAMHEEYDN CTEAQTWSLV PYTSDMNVLG
1760 1770 1780 1790 1800
SKWVFRTKLN ADGSLDKLKA RLVAKGFDQE EGIDYLETYS HVVRSATVRM
1810 1820 1830 1840 1850
VLHVATVMDW EVKQMDVKNA FLHGDLTETV YMLQPAGFVN KEKPTHVCHL
1860 1870 1880 1890 1900
HKALYGLKQA PRAWFDKFSN YLLEFGFNCS IKDPSLFIYL KGNDLILLLL
1910 1920 1930 1940
YVDDMVLTGS NSATMIKLLE DLNTQFRMKD LGQMHYFLGT QA
Length:1,942
Mass (Da):218,034
Last modified:January 1, 1998 - v1
Checksum:i5BB04A2CBFF42F37
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z97340 Genomic DNA. Translation: CAB10380.1.
AL161543 Genomic DNA. Translation: CAB78643.1.
PIRiB71426.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z97340 Genomic DNA. Translation: CAB10380.1.
AL161543 Genomic DNA. Translation: CAB78643.1.
PIRiB71426.

3D structure databases

ProteinModelPortaliO23450.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.420.10. 2 hits.
InterProiIPR004146. DC1.
IPR025724. GAG-pre-integrase_dom.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
IPR029472. UBN2_3.
[Graphical view]
PfamiPF03107. C1_2. 1 hit.
PF13976. gag_pre-integrs. 2 hits.
PF14244. Retrotran_gag_3. 1 hit.
PF07727. RVT_2. 2 hits.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiO23450_ARATH
AccessioniPrimary (citable) accession number: O23450
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 2, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.