O23248 (O23248_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Class IV chitinase EMBL CAA74930.1
EC=3.2.1.14 EMBL CAA74930.1

Gene names

Name:

CHIV EMBL CAA74930.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL CAA74930.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	274 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410

Ontologies

Keywords
Ligand	Chitin-binding SAAS SAAS001002 RuleBase RU000410
Molecular function	Glycosidase EMBL CAA74930.1 Hydrolase
PTM	Disulfide bond SAAS SAAS016283
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: UniProtKB-KW chitinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O23248 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: A100B06FB2BB603F	FASTA	274	29,569
	10 20 30 40 50 60 MLTPTISKSI SLVTILLVLQ AFSNTTKAQN CGCSSELCCS QFGFCGNTSD YCGVGCQQGP 70 80 90 100 110 120 CFAPPPANGV SVAEIVTQEF FNGIISQAAS SCAGNRFYSR GAFLEALDSY SRFGRVGSTD 130 140 150 160 170 180 DSRREIAAFF AHVTHETGRN FCYIEEIDGA SKDYCDENAT QYPCNPNKGY YGRGPIQLSW 190 200 210 220 230 240 NFNYGPAGTA IGFDGLNAPE TVATDPVISF KTALWYWTNR VQPVISQGFG ATIRAINGAL 250 260 270 ECDGANTATV QARVRYYTDY CRQLGVDPGN NLTC

References

[1]	"Arabidopsis thaliana class IV chitinase is early induced during the interaction with Xanthomonas campestris." Gerhardt L.B.A., Sachetto-Martins G., Contarini M.G., Sandroni M., Ferreira R.P., de Lima V.M., Cordeiro M.C., de Oliveira D.E., Margis-Pinheiro M. FEBS Lett. 419:69-75(1997) [PubMed: 9426222] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	Gehardt L.B.A. Submitted (AUG-1997) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Y14590 Genomic DNA. Translation: CAA74930.1.
IPI	IPI00546206.
3D structure databases
HSSP	HSSP built from PDB template 1MMC based on UniProtKB P27275.
ProteinModelPortal	O23248.
ModBase	Search...
Protein-protein interaction databases
STRING	O23248.
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Proteomic databases
PRIDE	O23248.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GenomeReviews	Gene locus AT3G54420 in contig BA000014_GR.
Phylogenomic databases
eggNOG	KOG4742.
HOGENOM	HBG748705.
PhylomeDB	O23248.
Gene expression databases
Genevestigator	O23248.
Family and domain databases
InterPro	IPR001002. Chitin-bd_1. IPR018371. Chitin-binding_1_CS. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. IPR023346. Lysozyme-like_dom. [Graphical view]
Gene3D	G3DSA:3.30.60.10. Chitin_bd_1. 1 hit.
Pfam	PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
PRINTS	PR00451. CHITINBINDNG.
ProDom	PD000609. Chitin_bd_1. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
SUPFAM	SSF57016. Chitin_bd_1. 1 hit. SSF53955. SSF53955. 1 hit.
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. PS00773. CHITINASE_19_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O23248_ARATH

Accession

Primary (citable) accession number: O23248

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	January 25, 2012
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)