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Protein
Submitted name:

MADS-box protein

Gene

C7A10.770

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MADS-box proteinImported
Submitted name:
MADS-box protein AGL40Imported
Submitted name:
MADS-box transcription factor family proteinImported
Submitted name:
Putative MADS-box proteinImported
Gene namesi
Name:C7A10.770Imported
Synonyms:AP22.88Imported, AP22_88Imported
Ordered Locus Names:At4g36590Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G36590.
TAIRilocus:2115420. AT4G36590.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

  • cytosol Source: TAIR
  • nucleus Source: UniProtKB-SubCell

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiO23222. 5 interactors.
STRINGi3702.AT4G36590.1.

Structurei

3D structure databases

SMRiO23222.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 66MADS-boxInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
OMAiVPISNMN.
OrthoDBiEOG09360KXL.

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
Gene3Di3.40.1810.10. 1 hit.
InterProiView protein in InterPro
IPR033896. MADS_MEF2-like.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS50066. MADS_BOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O23222-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRSTKGRQK IEMKKMENES NLQVTFSKRR FGLFKKASEL CTLSGAEILL
60 70 80 90 100
IVFSPGGKVF SFGHPSVQEL IHRFSNPNHN SAIVHHQNNN LQLVETRPDR
110 120 130 140 150
NIQYLNNILT EVLANQEKEK QKRMVLDLLK ESREQVGNWY EKDVKDLDMN
160 170 180 190 200
ETNQLISALQ DVKKKLVREM SQYSQVNVSQ NYFGQSSGVI GGGNVGIDLF
210 220 230 240
DQRRNAFNYN PNMVFPNHTP PMFGYNNDGV LVPISNMNYM SSYNFNQS
Length:248
Mass (Da):28,470
Last modified:May 1, 1999 - v2
Checksum:iB51237742D664FD7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY086178 mRNA. Translation: AAM64257.1.
AY141234 mRNA. Translation: AAN52798.1.
DQ446902 mRNA. Translation: ABE66117.1.
CP002687 Genomic DNA. Translation: AEE86675.1.
Z99708 Genomic DNA. Translation: CAB16834.1.
AL161589 Genomic DNA. Translation: CAB80325.1.
PIRiA85432.
RefSeqiNP_195377.1. NM_119822.1.
UniGeneiAt.31315.

Genome annotation databases

EnsemblPlantsiAT4G36590.1; AT4G36590.1; AT4G36590.
GeneIDi829811.
GrameneiAT4G36590.1; AT4G36590.1; AT4G36590.
KEGGiath:AT4G36590.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO23222_ARATH
AccessioniPrimary (citable) accession number: O23222
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: May 1, 1999
Last modified: July 5, 2017
This is version 139 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported