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Protein
Submitted name:

MADS-box protein

Gene

C7A10.770

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MADS-box proteinImported
Submitted name:
MADS-box protein AGL40Imported
Submitted name:
MADS-box transcription factor family proteinImported
Submitted name:
Putative MADS-box proteinImported
Gene namesi
Name:C7A10.770Imported
Synonyms:AP22.88Imported, AP22_88Imported
Ordered Locus Names:At4g36590Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G36590
TAIRilocus:2115420 AT4G36590

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiO23222 baseline and differential

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiO23222, 5 interactors
STRINGi3702.AT4G36590.1

Structurei

3D structure databases

SMRiO23222
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 66MADS-boxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili115 – 135Sequence analysisAdd BLAST21
Coiled coili149 – 169Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0014 Eukaryota
COG5068 LUCA
OMAiVPISNMN
OrthoDBiEOG09360KXL

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR033896 MADS_MEF2-like
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

O23222-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRSTKGRQK IEMKKMENES NLQVTFSKRR FGLFKKASEL CTLSGAEILL
60 70 80 90 100
IVFSPGGKVF SFGHPSVQEL IHRFSNPNHN SAIVHHQNNN LQLVETRPDR
110 120 130 140 150
NIQYLNNILT EVLANQEKEK QKRMVLDLLK ESREQVGNWY EKDVKDLDMN
160 170 180 190 200
ETNQLISALQ DVKKKLVREM SQYSQVNVSQ NYFGQSSGVI GGGNVGIDLF
210 220 230 240
DQRRNAFNYN PNMVFPNHTP PMFGYNNDGV LVPISNMNYM SSYNFNQS
Length:248
Mass (Da):28,470
Last modified:May 1, 1999 - v2
Checksum:iB51237742D664FD7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY086178 mRNA Translation: AAM64257.1
AY141234 mRNA Translation: AAN52798.1
DQ446902 mRNA Translation: ABE66117.1
CP002687 Genomic DNA Translation: AEE86675.1
Z99708 Genomic DNA Translation: CAB16834.1
AL161589 Genomic DNA Translation: CAB80325.1
PIRiA85432
RefSeqiNP_195377.1, NM_119822.1
UniGeneiAt.31315

Genome annotation databases

EnsemblPlantsiAT4G36590.1; AT4G36590.1; AT4G36590
GeneIDi829811
GrameneiAT4G36590.1; AT4G36590.1; AT4G36590
KEGGiath:AT4G36590

Similar proteinsi

Entry informationi

Entry nameiO23222_ARATH
AccessioniPrimary (citable) accession number: O23222
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: May 1, 1999
Last modified: May 23, 2018
This is version 146 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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