Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

CBS domain-containing protein CBSX1, chloroplastic

Gene

CBSX1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • cell redox homeostasis Source: TAIR

Names & Taxonomyi

Protein namesi
Recommended name:
CBS domain-containing protein CBSX1, chloroplastic
Alternative name(s):
CBS domain-containing protein 2
Short name:
AtCDCP2
Protein LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2
Short name:
AtLEJ2
Gene namesi
Name:CBSX1
Synonyms:CDCP2
Ordered Locus Names:At4g36910
ORF Names:AP22.61, C7A10.450
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G36910
TAIRilocus:2114970 AT4G36910

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 53ChloroplastCombined sourcesAdd BLAST53
ChainiPRO_000040398854 – 236CBS domain-containing protein CBSX1, chloroplasticAdd BLAST183

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei54N-acetylserineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiO23193

PTM databases

iPTMnetiO23193

Expressioni

Gene expression databases

ExpressionAtlasiO23193 baseline and differential
GenevisibleiO23193 AT

Interactioni

Protein-protein interaction databases

BioGridi15125, 4 interactors
IntActiO23193, 4 interactors
STRINGi3702.AT4G36910.1

Structurei

Secondary structure

1236
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi77 – 79Combined sources3
Beta strandi81 – 84Combined sources4
Helixi96 – 105Combined sources10
Beta strandi109 – 114Combined sources6
Beta strandi119 – 125Combined sources7
Helixi126 – 129Combined sources4
Helixi154 – 160Combined sources7
Helixi171 – 174Combined sources4
Beta strandi175 – 178Combined sources4
Beta strandi182 – 187Combined sources6
Helixi188 – 197Combined sources10
Beta strandi202 – 206Combined sources5
Beta strandi210 – 217Combined sources8
Helixi218 – 226Combined sources9

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4GQVX-ray2.39A72-236[»]
4GQWX-ray2.20A72-134[»]
A150-236[»]
ProteinModelPortaliO23193
SMRiO23193
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini81 – 142CBS 1PROSITE-ProRule annotationAdd BLAST62
Domaini175 – 231CBS 2PROSITE-ProRule annotationAdd BLAST57

Keywords - Domaini

CBS domain, Repeat, Transit peptide

Phylogenomic databases

eggNOGiENOG410IY0M Eukaryota
ENOG4111TWY LUCA
HOGENOMiHOG000187907
InParanoidiO23193
OMAiENSMFPE
OrthoDBiEOG09360OHX
PhylomeDBiO23193

Family and domain databases

InterProiView protein in InterPro
IPR000644 CBS_dom
PfamiView protein in Pfam
PF00571 CBS, 2 hits
SMARTiView protein in SMART
SM00116 CBS, 2 hits
PROSITEiView protein in PROSITE
PS51371 CBS, 2 hits

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O23193-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAVLYSVPL SFTPLRASSS PSSPYLLLPR FLSVQPCHKF TFSRSFPSKS
60 70 80 90 100
RIPSASSAAG STLMTNSSSP RSGVYTVGEF MTKKEDLHVV KPTTTVDEAL
110 120 130 140 150
ELLVENRITG FPVIDEDWKL VGLVSDYDLL ALDSISGSGR TENSMFPEVD
160 170 180 190 200
STWKTFNAVQ KLLSKTNGKL VGDLMTPAPL VVEEKTNLED AAKILLETKY
210 220 230
RRLPVVDSDG KLVGIITRGN VVRAALQIKR SGDRNA
Length:236
Mass (Da):25,769
Last modified:May 1, 1999 - v2
Checksum:iAE5D224F42A997D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z99707 Genomic DNA Translation: CAB16799.1
AL161590 Genomic DNA Translation: CAB80357.1
CP002687 Genomic DNA Translation: AEE86716.1
AY085164 mRNA Translation: AAM61717.1
BT003835 mRNA Translation: AAO41886.1
BT005190 mRNA Translation: AAO50723.1
PIRiH85435
RefSeqiNP_195409.1, NM_119855.4
UniGeneiAt.31287
At.65827

Genome annotation databases

EnsemblPlantsiAT4G36910.1; AT4G36910.1; AT4G36910
GeneIDi829844
GrameneiAT4G36910.1; AT4G36910.1; AT4G36910
KEGGiath:AT4G36910

Similar proteinsi

Entry informationi

Entry nameiCBSX1_ARATH
AccessioniPrimary (citable) accession number: O23193
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 8, 2011
Last sequence update: May 1, 1999
Last modified: April 25, 2018
This is version 105 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health