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O23072 (O23072_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
AT4g00300 protein EMBL CAB80788.1
Submitted name:
A_IG005I10.16 protein EMBL AAB62835.1
Submitted name:
F5I10.16 protein EMBL AAF02793.1
Submitted name:
Fringe-related protein EMBL AEE81851.1
Gene names
Name:A_IG005I10.16 EMBL AAB62835.1
Synonyms:AT4g00300 EMBL CAB80788.1, F5I10.16 EMBL AAF02793.1
Ordered Locus Names:At4g00300 TAIR At4g00300
ORF Names:AT4G00300 EMBL AEE81851.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAB62835.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length785 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
O23072 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: D522AEB6C20E2D82

FASTA78588,861
        10         20         30         40         50         60 
MGDQKTLSYD KSNKPFYSSS SSPCSFTAIV VFLIFVSYLL YSFSFISFLN PYSPSKSPNS 

        70         80         90        100        110        120 
LLVPVIRLGS GQTPEEQTEL KHIVFGIAAS SDLWKHRREY VKTWWKPNGV MNGAVWLDKP 

       130        140        150        160        170        180 
INDTVSSSSA LPQIRISSDT SSFKYRYRNG HRSAIRITRI VSETVRMLNG TEAERNVRWV 

       190        200        210        220        230        240 
VMGDDDTVFF TENLVRVLRK YDHKQFYYIG APSESHLQNL HQFSYGMAYG GGGFAISYPL 

       250        260        270        280        290        300 
AKVLEKMQDR CIERYSDLYG SDDRIHACMA ELGVPLTKEV GFHQFDVYGN LLGLLSVHPQ 

       310        320        330        340        350        360 
APIVSIHHLD VVDPIFPKTN RVNALKKLMI PAKLDSASLV QQSVCYDKSH QWTMSISWGY 

       370        380        390        400        410        420 
TVQITRTYMP ARMMEVPTRT FNDWHLRSDF TNLAFNTRPV TWTDCQRPRV FYFSHAFSNS 

       430        440        450        460        470        480 
SSSDTTTISQ YLRHDEWYPK CEWGIADPSE INQIFVYKKP TPDRWSKVVI RFVPSKDSNF 

       490        500        510        520        530        540 
AFVNAIEVIS APKDLIGDVA TSVSHDGTEK FNGLAKQAME VVYRVNVGGR KVTPFNDTLW 

       550        560        570        580        590        600 
RTWVTDEGFL KTGDGSSEKS YFTGRIKYRR GGASREVGPD NVYNTARVGK RSNGLVDMSW 

       610        620        630        640        650        660 
GFKVNVGYKY LIRMHFCDIA SKSLGRLYFN VYINGNLAYE DFDISYAADN VLASPYYIDF 

       670        680        690        700        710        720 
VVDATADDNN PSGSSITVSV GPSNKTSVDG NGVDAILNGV EIMKMNNSMG SLDGYVSTEM 

       730        740        750        760        770        780 
ILSTCPNRRN LSIFIAMLAF MCIFMSFYIV TQRKRVKDQY GWTKLSMDVL EDNSKSGNQF 


TARKA

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
EU, CSHL and WU Arabidopsis Sequencing Project
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. expand/collapse author list , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
Nature 402:769-777(1999) [PubMed: 10617198] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Waterston R.
Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[5]Waterston R.
Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]Wilson R., Lamar B., Stoneking T., Stumpf J., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[7]"The sequence of A. thaliana IG005I10."
Andrews S.
Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[8]"The A. thaliana Genome Sequencing Project."
WashU
Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[9]"The A. thaliana Genome Sequencing Project."
WashU
Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[10]"The sequence of A. thaliana F5I10."
Wilson R., Andrews S.
Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF013293 Genomic DNA. Translation: AAB62835.1.
AF195115 Genomic DNA. Translation: AAF02793.1.
CP002687 Genomic DNA. Translation: AEE81851.1.
AL161471 Genomic DNA. Translation: CAB80788.1.
IPIIPI00522527.
PIRT01541.
RefSeqNP_567166.1. NM_116251.2.
UniGeneAt.44524.

3D structure databases

ProteinModelPortalO23072.
ModBaseSearch...

Protein-protein interaction databases

STRINGO23072.

Protein family/group databases

CAZyGT31. Glycosyltransferase Family 31.

Proteomic databases

PRIDEO23072.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT4G00300.1; AT4G00300.1; AT4G00300.
GeneID828072.
GenomeReviewsGene locus AT4G00300 in contig CT486007_GR.
KEGGath:AT4G00300.
NMPDRfig|3702.1.peg.17787.

Organism-specific databases

TAIRAt4g00300.

Phylogenomic databases

eggNOGKOG2246.
GeneTreeEPGT00050000000455.
InParanoidO23072.
OMARCIERYS.
PhylomeDBO23072.
ProtClustDBCLSN2917461.

Gene expression databases

ArrayExpressO23072.
GenevestigatorO23072.

Family and domain databases

InterProIPR006740. DUF604.
IPR024788. Malectin-like_Carb-bd_dom.
[Graphical view]
PfamPF04646. DUF604. 1 hit.
PF12819. Malectin_like. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO23072_ARATH
AccessionPrimary (citable) accession number: O23072
Entry history
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: January 25, 2012
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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