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Protein
Submitted name:

AT4g24140/T19F6_130

Gene

T19F6.6

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Protein family/group databases

ESTHERiarath-T19F06.6. Bodyguard.
MEROPSiS33.A26.

Names & Taxonomyi

Protein namesi
Submitted name:
AT4g24140/T19F6_130Imported
Submitted name:
At4g24140/T19F6_130Imported
Submitted name:
Hydrolase, alpha/beta fold family proteinImported
Submitted name:
Putative uncharacterized protein AT4g24140Imported
Submitted name:
T19F6.6 proteinImported
Gene namesi
Name:T19F6.6Imported
Ordered Locus Names:At4g24140Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G24140.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G24140.1.

Structurei

3D structure databases

SMRiO22977. Positions 220-491.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini220 – 326107AB_hydrolase_1InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1454. Eukaryota.
COG0596. LUCA.
HOGENOMiHOG000243550.
OMAiCTSWAST.
PhylomeDBiO22977.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR000073. AB_hydrolase_1.
[Graphical view]
PfamiPF00561. Abhydrolase_1. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.

Sequencei

Sequence statusi: Complete.

O22977-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVMKIKGAA TVAGTWLNEA VSFVVFCILD IVDSFLCLLY KAADYLFEAE
60 70 80 90 100
WKPCYCLSDK EPITTTRGKI LLSHNNGESK ILTLSPLQEL GGRSKIELED
110 120 130 140 150
ISETLYTRPS LISDISTISV NELNKRFVKV TRSESECSGH NEKTKNKRRR
160 170 180 190 200
SLTKSSLTVN FTVVEMLRGK IRPQNLNHDI SRWSDCDCGF CTSWASTSDK
210 220 230 240 250
NHSLFVKTQI PNGVTAKEDV LFIHGFISSS AFWTETVFPS LSASSSTHRL
260 270 280 290 300
FAVDLLGFGK SPKPADSLYT LREHVEMIEK SVLHKYNVKS FHIVAHSLGC
310 320 330 340 350
ILALSLAARH GGLIKSLTLL APPYYPVPKG EKKPRQYVMK KVAPRKVWPP
360 370 380 390 400
IALGASMACW YEHISRTICL LICKHHRVWQ FIAGVLTRNN RTVNFLIEGF
410 420 430 440 450
MCHTHNAAWH TLHNIICGTG SKLDTYLDIV RDKLKCNVTI FHGGDDELIP
460 470 480 490
VECSYNVKQR IPRARVKVIE HKDHITMVVG RQDEFARELQ EIWKTSSC
Length:498
Mass (Da):56,211
Last modified:January 1, 1998 - v1
Checksum:iD28F8D75D7D317E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002343 Genomic DNA. Translation: AAB63611.1.
AY090352 mRNA. Translation: AAL91257.1.
BT002263 mRNA. Translation: AAN72274.1.
CP002687 Genomic DNA. Translation: AEE84854.1.
AL109619 Genomic DNA. Translation: CAB51657.1.
AL161560 Genomic DNA. Translation: CAB81332.1.
PIRiT13462.
RefSeqiNP_194145.1. NM_118546.3.
UniGeneiAt.32375.

Genome annotation databases

EnsemblPlantsiAT4G24140.1; AT4G24140.1; AT4G24140.
GeneIDi828514.
GrameneiAT4G24140.1; AT4G24140.1; AT4G24140.
KEGGiath:AT4G24140.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002343 Genomic DNA. Translation: AAB63611.1.
AY090352 mRNA. Translation: AAL91257.1.
BT002263 mRNA. Translation: AAN72274.1.
CP002687 Genomic DNA. Translation: AEE84854.1.
AL109619 Genomic DNA. Translation: CAB51657.1.
AL161560 Genomic DNA. Translation: CAB81332.1.
PIRiT13462.
RefSeqiNP_194145.1. NM_118546.3.
UniGeneiAt.32375.

3D structure databases

SMRiO22977. Positions 220-491.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G24140.1.

Protein family/group databases

ESTHERiarath-T19F06.6. Bodyguard.
MEROPSiS33.A26.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G24140.1; AT4G24140.1; AT4G24140.
GeneIDi828514.
GrameneiAT4G24140.1; AT4G24140.1; AT4G24140.
KEGGiath:AT4G24140.

Organism-specific databases

TAIRiAT4G24140.

Phylogenomic databases

eggNOGiKOG1454. Eukaryota.
COG0596. LUCA.
HOGENOMiHOG000243550.
OMAiCTSWAST.
PhylomeDBiO22977.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR000073. AB_hydrolase_1.
[Graphical view]
PfamiPF00561. Abhydrolase_1. 1 hit.
[Graphical view]
SUPFAMiSSF53474. SSF53474. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence."
    Rounsley S.D., Lin X., Ketchum K.A., Crosby M.L., Brandon R.C., Spriggs T.A., Mason T.M., Kerlavage A.R., Adams M.D., Somerville C.R., Venter J.C.
    Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    EU, CSHL and WU Arabidopsis Sequencing Project
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  3. Lin X.
    Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. Bevan M., Peters S.A., van Staveren M., Dirkse W., Stiekema W., Bancroft I., Mewes H.W., Lemcke K., Mayer K.F.X.
    Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. EU Arabidopsis sequencing project
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. Peters S.A., van Staveren M., Dirkse W., Stiekema W., Mewes H.W., Lemcke K., Mayer K.F.X.
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  7. Cited for: NUCLEOTIDE SEQUENCE.
  8. Cited for: NUCLEOTIDE SEQUENCE.
  9. TAIR10
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  10. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiO22977_ARATH
AccessioniPrimary (citable) accession number: O22977
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: April 13, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.