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Protein

Uncharacterized protein At2g34160

Gene

At2g34160

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein At2g34160
Gene namesi
Ordered Locus Names:At2g34160
ORF Names:T14G11.28
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G34160.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002206011 – 130Uncharacterized protein At2g34160Add BLAST130

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiO22969.
PRIDEiO22969.

Expressioni

Gene expression databases

ExpressionAtlasiO22969. baseline and differential.
GenevisibleiO22969. AT.

Interactioni

Subunit structurei

Homotetramer.1 Publication

Protein-protein interaction databases

BioGridi3324. 1 interactor.
STRINGi3702.AT2G34160.1.

Structurei

Secondary structure

1130
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi22 – 24Combined sources3
Helixi32 – 46Combined sources15
Beta strandi47 – 54Combined sources8
Helixi55 – 57Combined sources3
Helixi58 – 70Combined sources13
Beta strandi73 – 86Combined sources14
Turni89 – 92Combined sources4
Beta strandi95 – 106Combined sources12
Helixi110 – 116Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VM0X-ray1.80A/B2-130[»]
2Q3VX-ray1.80A/B2-130[»]
ProteinModelPortaliO22969.
SMRiO22969.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO22969.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IXHY. Eukaryota.
ENOG41121TC. LUCA.
HOGENOMiHOG000237559.
InParanoidiO22969.
OMAiKIEITLV.
OrthoDBiEOG09360VGO.
PhylomeDBiO22969.

Family and domain databases

Gene3Di3.30.110.20. 1 hit.
InterProiIPR002775. DNA/RNA-bd_Alba-like.
IPR014560. UCP030333_Alba.
[Graphical view]
PfamiPF01918. Alba. 1 hit.
[Graphical view]
PIRSFiPIRSF030333. UCP030333_Alba. 1 hit.
SUPFAMiSSF82704. SSF82704. 1 hit.

Sequencei

Sequence statusi: Complete.

O22969-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE
60 70 80 90 100
LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
110 120 130
EITLVKSEKF DELMAAANEE KEDAEAQVQN
Length:130
Mass (Da):14,617
Last modified:January 1, 1998 - v1
Checksum:iDFCD0A4E251C9C54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002341 Genomic DNA. Translation: AAB67633.1.
CP002685 Genomic DNA. Translation: AEC08926.1.
AY084411 mRNA. Translation: AAM60985.1.
AK117501 mRNA. Translation: BAC42164.1.
PIRiB84753.
RefSeqiNP_565781.1. NM_128967.3.
UniGeneiAt.37844.

Genome annotation databases

EnsemblPlantsiAT2G34160.1; AT2G34160.1; AT2G34160.
GeneIDi817977.
GrameneiAT2G34160.1; AT2G34160.1; AT2G34160.
KEGGiath:AT2G34160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002341 Genomic DNA. Translation: AAB67633.1.
CP002685 Genomic DNA. Translation: AEC08926.1.
AY084411 mRNA. Translation: AAM60985.1.
AK117501 mRNA. Translation: BAC42164.1.
PIRiB84753.
RefSeqiNP_565781.1. NM_128967.3.
UniGeneiAt.37844.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VM0X-ray1.80A/B2-130[»]
2Q3VX-ray1.80A/B2-130[»]
ProteinModelPortaliO22969.
SMRiO22969.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi3324. 1 interactor.
STRINGi3702.AT2G34160.1.

Proteomic databases

PaxDbiO22969.
PRIDEiO22969.

Protocols and materials databases

DNASUi817977.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G34160.1; AT2G34160.1; AT2G34160.
GeneIDi817977.
GrameneiAT2G34160.1; AT2G34160.1; AT2G34160.
KEGGiath:AT2G34160.

Organism-specific databases

TAIRiAT2G34160.

Phylogenomic databases

eggNOGiENOG410IXHY. Eukaryota.
ENOG41121TC. LUCA.
HOGENOMiHOG000237559.
InParanoidiO22969.
OMAiKIEITLV.
OrthoDBiEOG09360VGO.
PhylomeDBiO22969.

Miscellaneous databases

EvolutionaryTraceiO22969.
PROiO22969.

Gene expression databases

ExpressionAtlasiO22969. baseline and differential.
GenevisibleiO22969. AT.

Family and domain databases

Gene3Di3.30.110.20. 1 hit.
InterProiIPR002775. DNA/RNA-bd_Alba-like.
IPR014560. UCP030333_Alba.
[Graphical view]
PfamiPF01918. Alba. 1 hit.
[Graphical view]
PIRSFiPIRSF030333. UCP030333_Alba. 1 hit.
SUPFAMiSSF82704. SSF82704. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY2416_ARATH
AccessioniPrimary (citable) accession number: O22969
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: January 1, 1998
Last modified: November 30, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.