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Protein

Uncharacterized protein At2g34160

Gene

At2g34160

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein At2g34160
Gene namesi
Ordered Locus Names:At2g34160
ORF Names:T14G11.28
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRilocus:2055516. AT2G34160.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: TAIR

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002206011 – 130Uncharacterized protein At2g34160Add BLAST130

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiO22969.
PRIDEiO22969.

Expressioni

Gene expression databases

ExpressionAtlasiO22969. baseline and differential.
GenevisibleiO22969. AT.

Interactioni

Subunit structurei

Homotetramer.1 Publication

Protein-protein interaction databases

BioGridi3324. 1 interactor.
STRINGi3702.AT2G34160.1.

Structurei

Secondary structure

1130
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi22 – 24Combined sources3
Helixi32 – 46Combined sources15
Beta strandi47 – 54Combined sources8
Helixi55 – 57Combined sources3
Helixi58 – 70Combined sources13
Beta strandi73 – 86Combined sources14
Turni89 – 92Combined sources4
Beta strandi95 – 106Combined sources12
Helixi110 – 116Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VM0X-ray1.80A/B2-130[»]
2Q3VX-ray1.80A/B2-130[»]
ProteinModelPortaliO22969.
SMRiO22969.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO22969.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IXHY. Eukaryota.
ENOG41121TC. LUCA.
HOGENOMiHOG000237559.
InParanoidiO22969.
OMAiVDYTKHR.
OrthoDBiEOG09360VGO.
PhylomeDBiO22969.

Family and domain databases

Gene3Di3.30.110.20. 1 hit.
InterProiView protein in InterPro
IPR002775. DNA/RNA-bd_Alba-like.
IPR014560. UCP030333_Alba.
PfamiView protein in Pfam
PF01918. Alba. 1 hit.
PIRSFiPIRSF030333. UCP030333_Alba. 1 hit.
SUPFAMiSSF82704. SSF82704. 1 hit.

Sequencei

Sequence statusi: Complete.

O22969-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEITDGVNN MNLATDSQKK NRIQVSNTKK PLFFYVNLAK RYMQQYNDVE
60 70 80 90 100
LSALGMAIAT VVTVTEILKN NGFAVEKKIM TSTVDIKDDA RGRPVQKAKI
110 120 130
EITLVKSEKF DELMAAANEE KEDAEAQVQN
Length:130
Mass (Da):14,617
Last modified:January 1, 1998 - v1
Checksum:iDFCD0A4E251C9C54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002341 Genomic DNA. Translation: AAB67633.1.
CP002685 Genomic DNA. Translation: AEC08926.1.
AY084411 mRNA. Translation: AAM60985.1.
AK117501 mRNA. Translation: BAC42164.1.
PIRiB84753.
RefSeqiNP_565781.1. NM_128967.3.
UniGeneiAt.37844.

Genome annotation databases

EnsemblPlantsiAT2G34160.1; AT2G34160.1; AT2G34160.
GeneIDi817977.
GrameneiAT2G34160.1; AT2G34160.1; AT2G34160.
KEGGiath:AT2G34160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002341 Genomic DNA. Translation: AAB67633.1.
CP002685 Genomic DNA. Translation: AEC08926.1.
AY084411 mRNA. Translation: AAM60985.1.
AK117501 mRNA. Translation: BAC42164.1.
PIRiB84753.
RefSeqiNP_565781.1. NM_128967.3.
UniGeneiAt.37844.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VM0X-ray1.80A/B2-130[»]
2Q3VX-ray1.80A/B2-130[»]
ProteinModelPortaliO22969.
SMRiO22969.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi3324. 1 interactor.
STRINGi3702.AT2G34160.1.

Proteomic databases

PaxDbiO22969.
PRIDEiO22969.

Protocols and materials databases

DNASUi817977.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G34160.1; AT2G34160.1; AT2G34160.
GeneIDi817977.
GrameneiAT2G34160.1; AT2G34160.1; AT2G34160.
KEGGiath:AT2G34160.

Organism-specific databases

AraportiAT2G34160.
TAIRilocus:2055516. AT2G34160.

Phylogenomic databases

eggNOGiENOG410IXHY. Eukaryota.
ENOG41121TC. LUCA.
HOGENOMiHOG000237559.
InParanoidiO22969.
OMAiVDYTKHR.
OrthoDBiEOG09360VGO.
PhylomeDBiO22969.

Miscellaneous databases

EvolutionaryTraceiO22969.
PROiPR:O22969.

Gene expression databases

ExpressionAtlasiO22969. baseline and differential.
GenevisibleiO22969. AT.

Family and domain databases

Gene3Di3.30.110.20. 1 hit.
InterProiView protein in InterPro
IPR002775. DNA/RNA-bd_Alba-like.
IPR014560. UCP030333_Alba.
PfamiView protein in Pfam
PF01918. Alba. 1 hit.
PIRSFiPIRSF030333. UCP030333_Alba. 1 hit.
SUPFAMiSSF82704. SSF82704. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY2416_ARATH
AccessioniPrimary (citable) accession number: O22969
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: January 1, 1998
Last modified: June 7, 2017
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.