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O22921

- WRK25_ARATH

UniProt

O22921 - WRK25_ARATH

Protein

Probable WRKY transcription factor 25

Gene

WRKY25

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 108 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element By similarity.By similarity

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    DNA bindingi160 – 22465WRKY 1PROSITE-ProRule annotationAdd
    BLAST
    DNA bindingi322 – 38766WRKY 2PROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. protein binding Source: IntAct
    2. sequence-specific DNA binding Source: InterPro
    3. sequence-specific DNA binding transcription factor activity Source: TAIR

    GO - Biological processi

    1. cellular heat acclimation Source: TAIR
    2. cellular response to heat Source: TAIR
    3. response to cold Source: TAIR
    4. response to osmotic stress Source: TAIR
    5. response to salt stress Source: TAIR
    6. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable WRKY transcription factor 25
    Alternative name(s):
    WRKY DNA-binding protein 25
    Gene namesi
    Name:WRKY25
    Ordered Locus Names:At2g30250
    ORF Names:T9D9.6
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 2

    Organism-specific databases

    TAIRiAT2G30250.

    Subcellular locationi

    Nucleus Curated

    GO - Cellular componenti

    1. nucleus Source: TAIR

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 393393Probable WRKY transcription factor 25PRO_0000133667Add
    BLAST

    Post-translational modificationi

    Phosphorylated by MPK4.1 Publication

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    PRIDEiO22921.

    Expressioni

    Gene expression databases

    GenevestigatoriO22921.

    Interactioni

    Subunit structurei

    Interacts with MKS1.1 Publication

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    MKS1Q8LGD53EBI-1392386,EBI-1392198
    MPK4Q390242EBI-1392386,EBI-994375

    Protein-protein interaction databases

    BioGridi2924. 18 interactions.
    IntActiO22921. 3 interactions.
    MINTiMINT-8068882.
    STRINGi3702.AT2G30250.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliO22921.
    SMRiO22921. Positions 166-224, 326-387.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the WRKY group I family.Curated
    Contains 2 WRKY DNA-binding domains.PROSITE-ProRule annotation

    Keywords - Domaini

    Repeat

    Phylogenomic databases

    eggNOGiNOG302838.
    HOGENOMiHOG000242409.
    InParanoidiO22921.
    KOiK13423.
    OMAiEGMSIEV.
    PhylomeDBiO22921.

    Family and domain databases

    Gene3Di2.20.25.80. 2 hits.
    InterProiIPR003657. WRKY_DNA-bd.
    [Graphical view]
    PfamiPF03106. WRKY. 2 hits.
    [Graphical view]
    SMARTiSM00774. WRKY. 2 hits.
    [Graphical view]
    SUPFAMiSSF118290. SSF118290. 2 hits.
    PROSITEiPS50811. WRKY. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O22921-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSSTSFTDLL GSSGVDCYED DEDLRVSGSS FGGYYPERTG SGLPKFKTAQ    50
    PPPLPISQSS HNFTFSDYLD SPLLLSSSHS LISPTTGTFP LQGFNGTTNN 100
    HSDFPWQLQS QPSNASSALQ ETYGVQDHEK KQEMIPNEIA TQNNNQSFGT 150
    ERQIKIPAYM VSRNSNDGYG WRKYGQKQVK KSENPRSYFK CTYPDCVSKK 200
    IVETASDGQI TEIIYKGGHN HPKPEFTKRP SQSSLPSSVN GRRLFNPASV 250
    VSEPHDQSEN SSISFDYSDL EQKSFKSEYG EIDEEEEQPE MKRMKREGED 300
    EGMSIEVSKG VKEPRVVVQT ISDIDVLIDG FRWRKYGQKV VKGNTNPRSY 350
    YKCTFQGCGV KKQVERSAAD ERAVLTTYEG RHNHDIPTAL RRS 393
    Length:393
    Mass (Da):44,134
    Last modified:January 1, 1998 - v1
    Checksum:i9057D65B69E12A0C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF418309 mRNA. Translation: AAL13040.1.
    AC002338 Genomic DNA. Translation: AAC16930.1.
    AC004165 Genomic DNA. Translation: AAM14918.1.
    CP002685 Genomic DNA. Translation: AEC08362.1.
    AY062720 mRNA. Translation: AAL32798.1.
    AY114650 mRNA. Translation: AAM47969.1.
    AY136318 mRNA. Translation: AAM96984.1.
    AY045813 mRNA. Translation: AAK76487.2.
    BT002338 mRNA. Translation: AAN86171.1.
    BT008482 mRNA. Translation: AAP37841.1.
    PIRiT00575.
    RefSeqiNP_180584.1. NM_128578.3.
    UniGeneiAt.12235.

    Genome annotation databases

    EnsemblPlantsiAT2G30250.1; AT2G30250.1; AT2G30250.
    GeneIDi817575.
    KEGGiath:AT2G30250.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF418309 mRNA. Translation: AAL13040.1 .
    AC002338 Genomic DNA. Translation: AAC16930.1 .
    AC004165 Genomic DNA. Translation: AAM14918.1 .
    CP002685 Genomic DNA. Translation: AEC08362.1 .
    AY062720 mRNA. Translation: AAL32798.1 .
    AY114650 mRNA. Translation: AAM47969.1 .
    AY136318 mRNA. Translation: AAM96984.1 .
    AY045813 mRNA. Translation: AAK76487.2 .
    BT002338 mRNA. Translation: AAN86171.1 .
    BT008482 mRNA. Translation: AAP37841.1 .
    PIRi T00575.
    RefSeqi NP_180584.1. NM_128578.3.
    UniGenei At.12235.

    3D structure databases

    ProteinModelPortali O22921.
    SMRi O22921. Positions 166-224, 326-387.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 2924. 18 interactions.
    IntActi O22921. 3 interactions.
    MINTi MINT-8068882.
    STRINGi 3702.AT2G30250.1-P.

    Proteomic databases

    PRIDEi O22921.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT2G30250.1 ; AT2G30250.1 ; AT2G30250 .
    GeneIDi 817575.
    KEGGi ath:AT2G30250.

    Organism-specific databases

    TAIRi AT2G30250.

    Phylogenomic databases

    eggNOGi NOG302838.
    HOGENOMi HOG000242409.
    InParanoidi O22921.
    KOi K13423.
    OMAi EGMSIEV.
    PhylomeDBi O22921.

    Gene expression databases

    Genevestigatori O22921.

    Family and domain databases

    Gene3Di 2.20.25.80. 2 hits.
    InterProi IPR003657. WRKY_DNA-bd.
    [Graphical view ]
    Pfami PF03106. WRKY. 2 hits.
    [Graphical view ]
    SMARTi SM00774. WRKY. 2 hits.
    [Graphical view ]
    SUPFAMi SSF118290. SSF118290. 2 hits.
    PROSITEi PS50811. WRKY. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Arabidopsis thaliana transcription factor WRKY25."
      Ulker B., Kushnir S., Somssich I.E.
      Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Columbia.
      Tissue: Flower.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    3. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    4. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    5. Cited for: INTERACTION WITH MKS1, PHOSPHORYLATION.

    Entry informationi

    Entry nameiWRK25_ARATH
    AccessioniPrimary (citable) accession number: O22921
    Secondary accession number(s): Q94AT4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 15, 2002
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 108 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3