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Protein

Probable WRKY transcription factor 23

Gene

WRKY23

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi168 – 233WRKYPROSITE-ProRule annotationAdd BLAST66

GO - Molecular functioni

  • DNA binding transcription factor activity Source: TAIR
  • sequence-specific DNA binding Source: InterPro

GO - Biological processi

  • response to auxin Source: TAIR
  • response to nematode Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Probable WRKY transcription factor 23
Alternative name(s):
WRKY DNA-binding protein 23
Gene namesi
Name:WRKY23
Ordered Locus Names:At2g47260
ORF Names:T8I13.10
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G47260
TAIRilocus:2065124 AT2G47260

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001336651 – 337Probable WRKY transcription factor 23Add BLAST337

Proteomic databases

PaxDbiO22900
PRIDEiO22900

Expressioni

Gene expression databases

ExpressionAtlasiO22900 baseline and differential
GenevisibleiO22900 AT

Interactioni

Protein-protein interaction databases

BioGridi4674, 1 interactor
IntActiO22900, 1 interactor
STRINGi3702.AT2G47260.1

Structurei

3D structure databases

ProteinModelPortaliO22900
SMRiO22900
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the WRKY group II-c family.Curated

Phylogenomic databases

eggNOGiENOG410IXGH Eukaryota
ENOG410YRNP LUCA
HOGENOMiHOG000238090
InParanoidiO22900
OMAiNSHANEY
OrthoDBiEOG09360JDW
PhylomeDBiO22900

Family and domain databases

Gene3Di2.20.25.80, 1 hit
InterProiView protein in InterPro
IPR017396 TF_WRKY_IIc
IPR003657 WRKY_dom
IPR036576 WRKY_dom_sf
PfamiView protein in Pfam
PF03106 WRKY, 1 hit
PIRSFiPIRSF038130 TF_WRKY_IIc, 1 hit
SMARTiView protein in SMART
SM00774 WRKY, 1 hit
SUPFAMiSSF118290 SSF118290, 1 hit
PROSITEiView protein in PROSITE
PS50811 WRKY, 1 hit

Sequencei

Sequence statusi: Complete.

O22900-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV
60 70 80 90 100
SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
110 120 130 140 150
NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK
160 170 180 190 200
KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
210 220 230 240 250
TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA
260 270 280 290 300
ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
310 320 330
SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Length:337
Mass (Da):37,685
Last modified:January 1, 1998 - v1
Checksum:iD2A2D19C3E7C9E55
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti331S → Y in AAM61221 (Ref. 6) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY052647 mRNA Translation: AAL11008.1
AC002337 Genomic DNA Translation: AAB63826.1
CP002685 Genomic DNA Translation: AEC10821.1
AK117918 mRNA Translation: BAC42556.1
BT006238 mRNA Translation: AAP12887.1
AY084658 mRNA Translation: AAM61221.1
PIRiA84913
RefSeqiNP_182248.1, NM_130294.4
UniGeneiAt.24867

Genome annotation databases

EnsemblPlantsiAT2G47260.1; AT2G47260.1; AT2G47260
GeneIDi819339
GrameneiAT2G47260.1; AT2G47260.1; AT2G47260
KEGGiath:AT2G47260

Similar proteinsi

Entry informationi

Entry nameiWRK23_ARATH
AccessioniPrimary (citable) accession number: O22900
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 11, 2003
Last sequence update: January 1, 1998
Last modified: April 25, 2018
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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