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Protein

Probable WRKY transcription factor 23

Gene

WRKY23

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi168 – 233WRKYPROSITE-ProRule annotationAdd BLAST66

GO - Molecular functioni

GO - Biological processi

  • response to auxin Source: TAIR
  • response to nematode Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable WRKY transcription factor 23
Alternative name(s):
WRKY DNA-binding protein 23
Gene namesi
Name:WRKY23
Ordered Locus Names:At2g47260
ORF Names:T8I13.10
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G47260.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001336651 – 337Probable WRKY transcription factor 23Add BLAST337

Proteomic databases

PaxDbiO22900.
PRIDEiO22900.

Expressioni

Gene expression databases

GenevisibleiO22900. AT.

Interactioni

Protein-protein interaction databases

BioGridi4674. 1 interactor.
IntActiO22900. 1 interactor.
STRINGi3702.AT2G47260.1.

Structurei

3D structure databases

ProteinModelPortaliO22900.
SMRiO22900.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the WRKY group II-c family.Curated
Contains 1 WRKY DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410IXGH. Eukaryota.
ENOG410YRNP. LUCA.
HOGENOMiHOG000238090.
InParanoidiO22900.
OMAiNSHANEY.
OrthoDBiEOG09360JDW.
PhylomeDBiO22900.

Family and domain databases

Gene3Di2.20.25.80. 1 hit.
InterProiIPR017396. TF_WRKY_IIc.
IPR003657. WRKY_dom.
[Graphical view]
PfamiPF03106. WRKY. 1 hit.
[Graphical view]
PIRSFiPIRSF038130. TF_WRKY_IIc. 1 hit.
SMARTiSM00774. WRKY. 1 hit.
[Graphical view]
SUPFAMiSSF118290. SSF118290. 1 hit.
PROSITEiPS50811. WRKY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O22900-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV
60 70 80 90 100
SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
110 120 130 140 150
NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK
160 170 180 190 200
KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
210 220 230 240 250
TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA
260 270 280 290 300
ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
310 320 330
SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Length:337
Mass (Da):37,685
Last modified:January 1, 1998 - v1
Checksum:iD2A2D19C3E7C9E55
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti331S → Y in AAM61221 (Ref. 6) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY052647 mRNA. Translation: AAL11008.1.
AC002337 Genomic DNA. Translation: AAB63826.1.
CP002685 Genomic DNA. Translation: AEC10821.1.
AK117918 mRNA. Translation: BAC42556.1.
BT006238 mRNA. Translation: AAP12887.1.
AY084658 mRNA. Translation: AAM61221.1.
PIRiA84913.
RefSeqiNP_182248.1. NM_130294.4.
UniGeneiAt.24867.

Genome annotation databases

EnsemblPlantsiAT2G47260.1; AT2G47260.1; AT2G47260.
GeneIDi819339.
GrameneiAT2G47260.1; AT2G47260.1; AT2G47260.
KEGGiath:AT2G47260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY052647 mRNA. Translation: AAL11008.1.
AC002337 Genomic DNA. Translation: AAB63826.1.
CP002685 Genomic DNA. Translation: AEC10821.1.
AK117918 mRNA. Translation: BAC42556.1.
BT006238 mRNA. Translation: AAP12887.1.
AY084658 mRNA. Translation: AAM61221.1.
PIRiA84913.
RefSeqiNP_182248.1. NM_130294.4.
UniGeneiAt.24867.

3D structure databases

ProteinModelPortaliO22900.
SMRiO22900.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4674. 1 interactor.
IntActiO22900. 1 interactor.
STRINGi3702.AT2G47260.1.

Proteomic databases

PaxDbiO22900.
PRIDEiO22900.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G47260.1; AT2G47260.1; AT2G47260.
GeneIDi819339.
GrameneiAT2G47260.1; AT2G47260.1; AT2G47260.
KEGGiath:AT2G47260.

Organism-specific databases

TAIRiAT2G47260.

Phylogenomic databases

eggNOGiENOG410IXGH. Eukaryota.
ENOG410YRNP. LUCA.
HOGENOMiHOG000238090.
InParanoidiO22900.
OMAiNSHANEY.
OrthoDBiEOG09360JDW.
PhylomeDBiO22900.

Miscellaneous databases

PROiO22900.

Gene expression databases

GenevisibleiO22900. AT.

Family and domain databases

Gene3Di2.20.25.80. 1 hit.
InterProiIPR017396. TF_WRKY_IIc.
IPR003657. WRKY_dom.
[Graphical view]
PfamiPF03106. WRKY. 1 hit.
[Graphical view]
PIRSFiPIRSF038130. TF_WRKY_IIc. 1 hit.
SMARTiSM00774. WRKY. 1 hit.
[Graphical view]
SUPFAMiSSF118290. SSF118290. 1 hit.
PROSITEiPS50811. WRKY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiWRK23_ARATH
AccessioniPrimary (citable) accession number: O22900
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 11, 2003
Last sequence update: January 1, 1998
Last modified: November 30, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.