O22841 (O22841_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitinase-like protein EMBL AEC10296.1

Submitted name:
Putative endochitinase EMBL AAB64044.1

Gene names

Ordered Locus Names:	At2g43620 TAIR At2g43620
ORF Names:	AT2G43620 EMBL AEC10296.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAB64044.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	283 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410

Ontologies

Keywords
Ligand	Chitin-binding SAAS SAAS001002 RuleBase RU000410
PTM	Disulfide bond SAAS SAAS016283
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	apoplast Inferred from direct assay. Source: TAIR
Molecular function	chitin binding Inferred from electronic annotation. Source: UniProtKB-KW chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O22841 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: D758222971EE8404	FASTA	283	30,378
	10 20 30 40 50 60 MATLRAMLKN AFILFLFTLT IMAKTVFSQQ CGTTGCAANL CCSRYGYCGT TDAYCGTGCR 70 80 90 100 110 120 SGPCSSSTTP IPPTPSGGAG GLNADPRDTI ENVVTPAFFD GIMSKVGNGC PAKGFYTRQA 130 140 150 160 170 180 FIAAAQSFDA YKGTVAKREI AAMLAQFSHE SGSFCYKEEI ARGKYCSPST AYPCTPGKDY 190 200 210 220 230 240 YGRGPIQITW NYNYGAAGKF LGLPLLTDPD MVARSPQVAF QCAMWFWNLN VRPVLDQGFG 250 260 270 280 ATTRKINGGE CNGRRPAAVQ SRVNYYLEFC RTLGITPGAN LSC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana." Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C. Nature 402:761-768(1999) [PubMed: 10617197] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	TAIR Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[4]	Town C.D., Kaul S. Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	Rounsley S.D., Lin X., Ketchum K.A., Crosby M.L., Brandon R.C., Spriggs T.A., Mason T.M., Kerlavage A.R., Adams M.D., Somerville C.R., Venter J.C. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC002333 Genomic DNA. Translation: AAB64044.1. CP002685 Genomic DNA. Translation: AEC10296.1.
IPI	IPI00524185.
PIR	D84868.
RefSeq	NP_181890.1. NM_129924.2.
UniGene	At.43170.
3D structure databases
HSSP	HSSP built from PDB template 9WGA based on UniProtKB P02876.
ProteinModelPortal	O22841.
SMR	O22841. Positions 27-61, 89-283.
ModBase	Search...
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Proteomic databases
PRIDE	O22841.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT2G43620.1; AT2G43620.1; AT2G43620.
GeneID	818964.
GenomeReviews	Gene locus AT2G43620 in contig CT485783_GR.
KEGG	ath:AT2G43620.
NMPDR	fig|3702.1.peg.11519.
Organism-specific databases
TAIR	At2g43620.
Phylogenomic databases
eggNOG	KOG4742.
GeneTree	EPGT00070000027946.
HOGENOM	HBG748705.
InParanoid	O22841.
OMA	KINGGEC.
PhylomeDB	O22841.
ProtClustDB	CLSN2682905.
Gene expression databases
ArrayExpress	O22841.
Genevestigator	O22841.
Family and domain databases
InterPro	IPR001002. Chitin-bd_1. IPR018371. Chitin-binding_1_CS. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. IPR023346. Lysozyme-like_dom. [Graphical view]
Gene3D	G3DSA:3.30.60.10. Chitin_bd_1. 1 hit.
Pfam	PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
PRINTS	PR00451. CHITINBINDNG.
ProDom	PD000609. Chitin_bd_1. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
SUPFAM	SSF57016. Chitin_bd_1. 1 hit. SSF53955. SSF53955. 1 hit.
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O22841_ARATH

Accession

Primary (citable) accession number: O22841

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	January 1, 1998
Last modified:	January 25, 2012
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)