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O22833 (LRK54_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 106. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
L-type lectin-domain containing receptor kinase V.4

Short name=Arabidopsis thaliana lectin-receptor kinase c1
Short name=AthlecRK-c1
Short name=LecRK-V.4
EC=2.7.11.1
Gene names
Name:LECRK54
Synonyms:LECRKC1
Ordered Locus Names:At2g43700
ORF Names:F18O19.19
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length658 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

ATP + a protein = ADP + a phosphoprotein.

Subcellular location

Cell membrane; Single-pass type I membrane protein By similarity.

Sequence similarities

In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

In the N-terminal section; belongs to the leguminous lectin family.

Contains 1 protein kinase domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential
Chain26 – 658633L-type lectin-domain containing receptor kinase V.4
PRO_0000403092

Regions

Topological domain26 – 280255Extracellular Potential
Transmembrane281 – 30121Helical; Potential
Topological domain302 – 658357Cytoplasmic Potential
Domain334 – 592259Protein kinase
Nucleotide binding340 – 3489ATP By similarity
Region26 – 248223Legume-lectin like

Sites

Active site4601Proton acceptor By similarity
Binding site3631ATP By similarity

Amino acid modifications

Glycosylation661N-linked (GlcNAc...) Potential
Glycosylation1961N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
O22833 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 66E871108F732BB1

FASTA65873,906
        10         20         30         40         50         60 
MSRTIGSRVI FLILALFCCT ENSRGKLVMQ GSAGFFKGYR TLTSTKKHAY GQAFEDEIVP 

        70         80         90        100        110        120 
FKNSANDTVT SFSVTFFFAI APEDKHKGAH GMAFVISPTR GITGASADQY LGIFNKANNG 

       130        140        150        160        170        180 
DSSNHVIAVE LDINKDEEFG DINDNHVGIN INGMRSIKFA PAGYYDQEGQ FKDLSLISGS 

       190        200        210        220        230        240 
LLRVTILYSQ MEKQLNVTLS SPEEAYYPNK PLLSLNQDLS PYILENMYVG FSASTGSVRA 

       250        260        270        280        290        300 
MHYMLSWFVH GGVDVPNLDL GIPTFPPYPK EKSLVYRIVL VTSLALVLFV ALVASALSIF 

       310        320        330        340        350        360 
FYRRHKKVKE VLEEWEIQCG PHRFAYKELF KATKGFKQLL GKGGFGQVFK GTLPGSDAEI 

       370        380        390        400        410        420 
AVKRISHDSK QGMQEFLAEI STIGRLRHQN LVRLQGYCRY KEELYLVYDF MPNGSLDKYL 

       430        440        450        460        470        480 
YHRANQEQLT WNQRFKIIKD IASALCYLHH EWVQVVIHRD IKPANVLIDH QMNARLGDFG 

       490        500        510        520        530        540 
LAKLYDQGYD PQTSRVAGTF WYIAPELIRS GRATTGTDVY AFGLFMLEVS CGRRLIERRT 

       550        560        570        580        590        600 
ASDEVVLAEW TLKCWENGDI LEAVNDGIRH EDNREQLELV LKLGVLCSHQ AVAIRPDMSK 

       610        620        630        640        650 
VVQILGGDLQ LPDNLLDIVK AEKVRMWSET SESVLGVLTS QGSIGTLTLT EPFTSRGR 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Characterization of the Arabidopsis lecRK-a genes: members of a superfamily encoding putative receptors with an extracellular domain homologous to legume lectins."
Herve C., Serres J., Dabos P., Canut H., Barre A., Rouge P., Lescure B.
Plant Mol. Biol. 39:671-682(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY.
[5]"Lectin receptor kinases in plants."
Barre A., Herve C., Lescure B., Rouge P.
Crit. Rev. Plant Sci. 21:379-399(2002)
Cited for: GENE FAMILY.
[6]"Arabidopsis L-type lectin receptor kinases: phylogeny, classification, and expression profiles."
Bouwmeester K., Govers F.
J. Exp. Bot. 60:4383-4396(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC002333 Genomic DNA. Translation: AAB64036.1.
CP002685 Genomic DNA. Translation: AEC10309.1.
AY074631 mRNA. Translation: AAL69447.1.
PIRD84869.
RefSeqNP_181898.1. NM_129932.6.
UniGeneAt.37031.

3D structure databases

ProteinModelPortalO22833.
SMRO22833. Positions 27-250, 267-608.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT2G43700.1-P.

Proteomic databases

PaxDbO22833.
PRIDEO22833.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G43700.1; AT2G43700.1; AT2G43700.
GeneID818972.
KEGGath:AT2G43700.

Organism-specific databases

GeneFarm92. 4.
TAIRAT2G43700.

Phylogenomic databases

eggNOGCOG0515.
HOGENOMHOG000116555.
InParanoidO22833.
OMANSANDTV.
PhylomeDBO22833.

Enzyme and pathway databases

BioCycARA:AT2G43700-MONOMER.

Gene expression databases

GenevestigatorO22833.

Family and domain databases

Gene3D2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR011009. Kinase-like_dom.
IPR001220. Legume_lectin_dom.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamPF00139. Lectin_legB. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEPS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameLRK54_ARATH
AccessionPrimary (citable) accession number: O22833
Entry history
Integrated into UniProtKB/Swiss-Prot: January 11, 2011
Last sequence update: January 1, 1998
Last modified: March 19, 2014
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names