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O22775 (GT2_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative glycosyltransferase 2
Short name=AtGT2
EC=2.4.-.-
Gene names
Name:GT2
Synonyms:GTL5
Ordered Locus Names:At4g02500
ORF Names:T14P8.23, T10P11.20
OrganismArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length461 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Golgi apparatus membrane; Single-pass type II membrane protein Potential.

Sequence similarities

Belongs to the glycosyltransferase 34 family.

Sequence caution

The sequence AAC78266.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence CAB80743.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 461461Putative glycosyltransferase 2
PRO_0000215170

Regions

Topological domain1 – 2020Cytoplasmic Potential
Transmembrane21 – 4020Helical; Signal-anchor for type II membrane protein; Potential
Topological domain41 – 461421Lumenal Potential

Amino acid modifications

Glycosylation4321N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
O22775 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: A5B98B5BCF110F98

FASTA46153,095
        10         20         30         40         50         60 
MIERCLGAYR CRRIQRALRQ LKVTILCLLL TVVVLRSTIG AGKFGTPEQD LDEIRQHFHA 

        70         80         90        100        110        120 
RKRGEPHRVL EEIQTGGDSS SGDGGGNSGG SNNYETFDIN KIFVDEGEEE KPDPNKPYTL 

       130        140        150        160        170        180 
GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI 

       190        200        210        220        230        240 
DYCRLHGIEI FYNMALLDAE MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL 

       250        260        270        280        290        300 
PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE 

       310        320        330        340        350        360 
AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM 

       370        380        390        400        410        420 
IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM DRAFNFGDNQ ILQIYGFTHK 

       430        440        450        460 
SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V

« Hide

References

« Hide 'large scale' references
[1]"A novel Arabidopsis Golgi glycosyltransferase."
Mogelsvang S., Dupree P.
Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. Columbia.
[2]"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. expand/collapse author list , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
Nature 402:769-777(1999) [PubMed: 10617198] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[4]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed: 14593172] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[5]"An Arabidopsis gene encoding an alpha-xylosyltransferase involved in xyloglucan biosynthesis."
Faik A., Price N.J., Raikhel N.V., Keegstra K.
Proc. Natl. Acad. Sci. U.S.A. 99:7797-7802(2002) [PubMed: 12032363] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AJ245571 mRNA. Translation: CAC01674.1.
AC002330 Genomic DNA. Translation: AAC78266.1. Sequence problems.
AF069298 Genomic DNA. Translation: AAC19271.1.
AL161494 Genomic DNA. Translation: CAB80743.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE82181.1.
AY057598 mRNA. Translation: AAL14393.1.
AY140029 mRNA. Translation: AAM98170.1.
BT006601 mRNA. Translation: AAP31945.1.
IPIIPI00518776.
PIRH85031.
T01300.
RefSeqNP_567241.1. NM_116484.2.
UniGeneAt.21214.
At.67608.

3D structure databases

ProteinModelPortalO22775.
SMRO22775. Positions 150-279.
ModBaseSearch...

Protein-protein interaction databases

STRINGO22775.

Protein family/group databases

CAZyGT34. Glycosyltransferase Family 34.

Proteomic databases

PRIDEO22775.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT4G02500.1; AT4G02500.1; AT4G02500.
GeneID827940.
GenomeReviewsGene locus AT4G02500 in contig CT486007_GR.
KEGGath:AT4G02500.
NMPDRfig|3702.1.peg.18064.

Organism-specific databases

TAIRAt4g02500.

Phylogenomic databases

eggNOGKOG4748.
GeneTreeEPGT00070000028691.
HOGENOMHBG319799.
InParanoidO22775.
OMADTWAPMG.
PhylomeDBO22775.
ProtClustDBPLN03182.

Enzyme and pathway databases

BioCycMetaCyc:MONOMER-16635.

Gene expression databases

ArrayExpressO22775.
GenevestigatorO22775.
GermOnlineAT4G02500. Arabidopsis thaliana.

Family and domain databases

InterProIPR008630. Glyco_trans_34.
[Graphical view]
KOK08238.
PfamPF05637. Glyco_transf_34. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGT2_ARATH
AccessionPrimary (citable) accession number: O22775
Secondary accession number(s): Q9SYY3
Entry history
Integrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: January 1, 1998
Last modified: December 14, 2011
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents