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Protein

Probable disease resistance protein At1g61190

Gene

At1g61190

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probable disease resistance protein.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi180 – 1878ATPSequence Analysis

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Plant defense

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable disease resistance protein At1g61190
Gene namesi
Ordered Locus Names:At1g61190
ORF Names:F11P17.9
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G61190.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 967967Probable disease resistance protein At1g61190PRO_0000212748Add
BLAST

Proteomic databases

PaxDbiO22727.
PRIDEiO22727.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G61190.1.

Structurei

3D structure databases

ProteinModelPortaliO22727.
SMRiO22727. Positions 174-478, 496-719, 741-774.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini138 – 441304NB-ARCAdd
BLAST
Repeati516 – 53722LRR 1Add
BLAST
Repeati538 – 55922LRR 2Add
BLAST
Repeati562 – 58524LRR 3Add
BLAST
Repeati586 – 60823LRR 4Add
BLAST
Repeati609 – 63123LRR 5Add
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili20 – 6849Sequence AnalysisAdd
BLAST

Domaini

The LRR repeats probably act as specificity determinant of pathogen recognition.By similarity

Sequence similaritiesi

Belongs to the disease resistance NB-LRR family.Curated
Contains 5 LRR (leucine-rich) repeats.Curated
Contains 1 NB-ARC domain.Curated

Keywords - Domaini

Coiled coil, Leucine-rich repeat, Repeat

Phylogenomic databases

eggNOGiNOG249426.
HOGENOMiHOG000238348.
InParanoidiO22727.
OMAiMELPSSH.
PhylomeDBiO22727.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001611. Leu-rich_rpt.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF13855. LRR_8. 1 hit.
PF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

O22727-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNFVCIEIS GDQMLDRIIR CLCGKGYIRN LEKNLRALQR EMEDLRATQH
60 70 80 90 100
EVQNKVAREE SRHQQRLEAV QVWLDRVNSI DIECKDLLSV SPVELQKLCL
110 120 130 140 150
CGLCSKYVCS SYKYGKRVFL LLEEVTKLKS EGNFDEVSQP PPRSEVEERP
160 170 180 190 200
TQPTIGQEEM LKKAWNRLME DGVGIMGLHG MGGVGKTTLF KKIHNKFAET
210 220 230 240 250
GGTFDIVIWI VVSQGAKLSK LQEDIAEKLH LCDDLWKNKN ESDKATDIHR
260 270 280 290 300
VLKGKRFVLM LDDIWEKVDL EAIGIPYPSE VNKCKVAFTT RDQKVCGQMG
310 320 330 340 350
DHKPMQVKCL EPEDAWELFK NKVGDNTLRS DPVIVGLARE VAQKCRGLPL
360 370 380 390 400
ALSCIGETMA SKTMVQEWEH AIDVLTRSAA EFSDMQNKIL PILKYSYDSL
410 420 430 440 450
EDEHIKSCFL YCALFPEDDK IDTKTLINKW ICEGFIGEDQ VIKRARNKGY
460 470 480 490 500
EMLGTLIRAN LLTNDRGFVK WHVVMHDVVR EMALWIASDF GKQKENYVVR
510 520 530 540 550
ARVGLHEIPK VKDWGAVRRM SLMMNEIEEI TCESKCSELT TLFLQSNQLK
560 570 580 590 600
NLSGEFIRYM QKLVVLDLSH NPDFNELPEQ ISGLVSLQYL DLSWTRIEQL
610 620 630 640 650
PVGLKELKKL IFLNLCFTER LCSISGISRL LSLRWLSLRE SNVHGDASVL
660 670 680 690 700
KELQQLENLQ DLRITESAEL ISLDQRLAKL ISVLRIEGFL QKPFDLSFLA
710 720 730 740 750
SMENLYGLLV ENSYFSEINI KCRESETESS YLHINPKIPC FTNLTGLIIM
760 770 780 790 800
KCHSMKDLTW ILFAPNLVNL DIRDSREVGE IINKEKAINL TSIITPFQKL
810 820 830 840 850
ERLFLYGLPK LESIYWSPLP FPLLSNIVVK YCPKLRKLPL NATSVPLVEE
860 870 880 890 900
FEIRMDPPEQ ENELEWEDED TKNRFLPSIK PLVRRLKIHY SGMGFLNVKN
910 920 930 940 950
QNPRFFFYCF IYLLVVHLDC IIDLHSDTSG MCCVVHLDYV FHFPFVFPKT
960
FCILFRLHFY TIKSLCV
Length:967
Mass (Da):111,532
Last modified:January 1, 1998 - v1
Checksum:i9037FAA7BFEC7827
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002294 Genomic DNA. Translation: AAB71476.1.
CP002684 Genomic DNA. Translation: AEE33801.1.
PIRiG96637.
RefSeqiNP_176314.1. NM_104800.1.
UniGeneiAt.36514.
At.71478.

Genome annotation databases

EnsemblPlantsiAT1G61190.1; AT1G61190.1; AT1G61190.
GeneIDi842412.
KEGGiath:AT1G61190.

Cross-referencesi

Web resourcesi

NIB-LRRS

Functional and comparative genomics of disease resistance gene homologs

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002294 Genomic DNA. Translation: AAB71476.1.
CP002684 Genomic DNA. Translation: AEE33801.1.
PIRiG96637.
RefSeqiNP_176314.1. NM_104800.1.
UniGeneiAt.36514.
At.71478.

3D structure databases

ProteinModelPortaliO22727.
SMRiO22727. Positions 174-478, 496-719, 741-774.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G61190.1.

Proteomic databases

PaxDbiO22727.
PRIDEiO22727.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G61190.1; AT1G61190.1; AT1G61190.
GeneIDi842412.
KEGGiath:AT1G61190.

Organism-specific databases

TAIRiAT1G61190.

Phylogenomic databases

eggNOGiNOG249426.
HOGENOMiHOG000238348.
InParanoidiO22727.
OMAiMELPSSH.
PhylomeDBiO22727.

Miscellaneous databases

PROiO22727.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001611. Leu-rich_rpt.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF13855. LRR_8. 1 hit.
PF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiDRL16_ARATH
AccessioniPrimary (citable) accession number: O22727
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: January 1, 1998
Last modified: June 24, 2015
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.