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O22727

- DRL16_ARATH

UniProt

O22727 - DRL16_ARATH

Protein

Probable disease resistance protein At1g61190

Gene

At1g61190

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 95 (01 Oct 2014)
      Sequence version 1 (01 Jan 1998)
      Previous versions | rss
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    Functioni

    Probable disease resistance protein.By similarity

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi180 – 1878ATPSequence Analysis

    GO - Molecular functioni

    1. ADP binding Source: InterPro
    2. ATP binding Source: UniProtKB-KW

    GO - Biological processi

    1. defense response Source: UniProtKB-KW

    Keywords - Biological processi

    Plant defense

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable disease resistance protein At1g61190
    Gene namesi
    Ordered Locus Names:At1g61190
    ORF Names:F11P17.9
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G61190.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 967967Probable disease resistance protein At1g61190PRO_0000212748Add
    BLAST

    Proteomic databases

    PaxDbiO22727.
    PRIDEiO22727.

    Expressioni

    Gene expression databases

    GenevestigatoriO22727.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G61190.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliO22727.
    SMRiO22727. Positions 174-478, 508-666, 743-775, 797-839.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini138 – 441304NB-ARCAdd
    BLAST
    Repeati516 – 53722LRR 1Add
    BLAST
    Repeati538 – 55922LRR 2Add
    BLAST
    Repeati562 – 58524LRR 3Add
    BLAST
    Repeati586 – 60823LRR 4Add
    BLAST
    Repeati609 – 63123LRR 5Add
    BLAST

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili20 – 6849Sequence AnalysisAdd
    BLAST

    Domaini

    The LRR repeats probably act as specificity determinant of pathogen recognition.By similarity

    Sequence similaritiesi

    Belongs to the disease resistance NB-LRR family.Curated
    Contains 5 LRR (leucine-rich) repeats.Curated
    Contains 1 NB-ARC domain.Curated

    Keywords - Domaini

    Coiled coil, Leucine-rich repeat, Repeat

    Phylogenomic databases

    eggNOGiNOG249426.
    HOGENOMiHOG000238348.
    InParanoidiO22727.
    OMAiHINAVET.
    PhylomeDBiO22727.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR000767. Disease_R.
    IPR001611. Leu-rich_rpt.
    IPR002182. NB-ARC.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF13855. LRR_8. 1 hit.
    PF00931. NB-ARC. 1 hit.
    [Graphical view]
    PRINTSiPR00364. DISEASERSIST.
    SUPFAMiSSF52540. SSF52540. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    O22727-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGNFVCIEIS GDQMLDRIIR CLCGKGYIRN LEKNLRALQR EMEDLRATQH    50
    EVQNKVAREE SRHQQRLEAV QVWLDRVNSI DIECKDLLSV SPVELQKLCL 100
    CGLCSKYVCS SYKYGKRVFL LLEEVTKLKS EGNFDEVSQP PPRSEVEERP 150
    TQPTIGQEEM LKKAWNRLME DGVGIMGLHG MGGVGKTTLF KKIHNKFAET 200
    GGTFDIVIWI VVSQGAKLSK LQEDIAEKLH LCDDLWKNKN ESDKATDIHR 250
    VLKGKRFVLM LDDIWEKVDL EAIGIPYPSE VNKCKVAFTT RDQKVCGQMG 300
    DHKPMQVKCL EPEDAWELFK NKVGDNTLRS DPVIVGLARE VAQKCRGLPL 350
    ALSCIGETMA SKTMVQEWEH AIDVLTRSAA EFSDMQNKIL PILKYSYDSL 400
    EDEHIKSCFL YCALFPEDDK IDTKTLINKW ICEGFIGEDQ VIKRARNKGY 450
    EMLGTLIRAN LLTNDRGFVK WHVVMHDVVR EMALWIASDF GKQKENYVVR 500
    ARVGLHEIPK VKDWGAVRRM SLMMNEIEEI TCESKCSELT TLFLQSNQLK 550
    NLSGEFIRYM QKLVVLDLSH NPDFNELPEQ ISGLVSLQYL DLSWTRIEQL 600
    PVGLKELKKL IFLNLCFTER LCSISGISRL LSLRWLSLRE SNVHGDASVL 650
    KELQQLENLQ DLRITESAEL ISLDQRLAKL ISVLRIEGFL QKPFDLSFLA 700
    SMENLYGLLV ENSYFSEINI KCRESETESS YLHINPKIPC FTNLTGLIIM 750
    KCHSMKDLTW ILFAPNLVNL DIRDSREVGE IINKEKAINL TSIITPFQKL 800
    ERLFLYGLPK LESIYWSPLP FPLLSNIVVK YCPKLRKLPL NATSVPLVEE 850
    FEIRMDPPEQ ENELEWEDED TKNRFLPSIK PLVRRLKIHY SGMGFLNVKN 900
    QNPRFFFYCF IYLLVVHLDC IIDLHSDTSG MCCVVHLDYV FHFPFVFPKT 950
    FCILFRLHFY TIKSLCV 967
    Length:967
    Mass (Da):111,532
    Last modified:January 1, 1998 - v1
    Checksum:i9037FAA7BFEC7827
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC002294 Genomic DNA. Translation: AAB71476.1.
    CP002684 Genomic DNA. Translation: AEE33801.1.
    PIRiG96637.
    RefSeqiNP_176314.1. NM_104800.1.
    UniGeneiAt.36514.
    At.71478.

    Genome annotation databases

    EnsemblPlantsiAT1G61190.1; AT1G61190.1; AT1G61190.
    GeneIDi842412.
    KEGGiath:AT1G61190.

    Cross-referencesi

    Web resourcesi

    NIB-LRRS

    Functional and comparative genomics of disease resistance gene homologs

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC002294 Genomic DNA. Translation: AAB71476.1 .
    CP002684 Genomic DNA. Translation: AEE33801.1 .
    PIRi G96637.
    RefSeqi NP_176314.1. NM_104800.1.
    UniGenei At.36514.
    At.71478.

    3D structure databases

    ProteinModelPortali O22727.
    SMRi O22727. Positions 174-478, 508-666, 743-775, 797-839.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G61190.1-P.

    Proteomic databases

    PaxDbi O22727.
    PRIDEi O22727.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G61190.1 ; AT1G61190.1 ; AT1G61190 .
    GeneIDi 842412.
    KEGGi ath:AT1G61190.

    Organism-specific databases

    TAIRi AT1G61190.

    Phylogenomic databases

    eggNOGi NOG249426.
    HOGENOMi HOG000238348.
    InParanoidi O22727.
    OMAi HINAVET.
    PhylomeDBi O22727.

    Gene expression databases

    Genevestigatori O22727.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR000767. Disease_R.
    IPR001611. Leu-rich_rpt.
    IPR002182. NB-ARC.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF13855. LRR_8. 1 hit.
    PF00931. NB-ARC. 1 hit.
    [Graphical view ]
    PRINTSi PR00364. DISEASERSIST.
    SUPFAMi SSF52540. SSF52540. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.

    Entry informationi

    Entry nameiDRL16_ARATH
    AccessioniPrimary (citable) accession number: O22727
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 13, 2004
    Last sequence update: January 1, 1998
    Last modified: October 1, 2014
    This is version 95 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3