Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Cytochrome B5-like protein

Gene

CB5LP

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi81 – 811Iron (heme axial ligand)PROSITE-ProRule annotation
Metal bindingi104 – 1041Iron (heme axial ligand)PROSITE-ProRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Heme, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cytochrome B5-like protein1 Publication
Short name:
AtCb5LP1 Publication
Alternative name(s):
Cytochrome b5 isoform F1 Publication
Short name:
AtCb5-F1 Publication
Gene namesi
Name:CB5LP1 Publication
Synonyms:CB5-F1 Publication
Ordered Locus Names:At1g60660Imported
ORF Names:F8A5.18Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G60660.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei1 – 2121HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 121121Cytochrome B5-like proteinPRO_0000430956Add
BLAST

Proteomic databases

PaxDbiO22704.
PRIDEiO22704.

PTM databases

iPTMnetiO22704.

Expressioni

Gene expression databases

GenevisibleiO22704. AT.

Interactioni

Protein-protein interaction databases

BioGridi27584. 1 interaction.
IntActiO22704. 1 interaction.
STRINGi3702.AT1G60660.1.

Structurei

3D structure databases

ProteinModelPortaliO22704.
SMRiO22704. Positions 47-96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini46 – 12176Cytochrome b5 heme-bindingPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the cytochrome b5 family.Curated
Contains 1 cytochrome b5 heme-binding domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0537. Eukaryota.
COG5274. LUCA.
HOGENOMiHOG000039853.
InParanoidiO22704.
OMAiHNKRNDC.
OrthoDBiEOG09360XGO.
PhylomeDBiO22704.

Family and domain databases

Gene3Di3.10.120.10. 1 hit.
InterProiIPR001199. Cyt_B5-like_heme/steroid-bd.
IPR018506. Cyt_B5_heme-BS.
[Graphical view]
PfamiPF00173. Cyt-b5. 1 hit.
[Graphical view]
PRINTSiPR00363. CYTOCHROMEB5.
SMARTiSM01117. Cyt-b5. 1 hit.
[Graphical view]
SUPFAMiSSF55856. SSF55856. 1 hit.
PROSITEiPS00191. CYTOCHROME_B5_1. 1 hit.
PS50255. CYTOCHROME_B5_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O22704-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS
60 70 80 90 100
KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
110 120
GPQHATRVFD MIEDFYIGEL H
Length:121
Mass (Da):13,709
Last modified:January 1, 1998 - v1
Checksum:i59E729C7EBAAA525
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002292 Genomic DNA. Translation: AAB71978.1.
CP002684 Genomic DNA. Translation: AEE33716.1.
AY049297 mRNA. Translation: AAK83639.1.
AY133575 mRNA. Translation: AAM91405.1.
PIRiH96631.
RefSeqiNP_176265.1. NM_104749.2.
UniGeneiAt.19208.

Genome annotation databases

EnsemblPlantsiAT1G60660.1; AT1G60660.1; AT1G60660.
GeneIDi842360.
GrameneiAT1G60660.1; AT1G60660.1; AT1G60660.
KEGGiath:AT1G60660.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002292 Genomic DNA. Translation: AAB71978.1.
CP002684 Genomic DNA. Translation: AEE33716.1.
AY049297 mRNA. Translation: AAK83639.1.
AY133575 mRNA. Translation: AAM91405.1.
PIRiH96631.
RefSeqiNP_176265.1. NM_104749.2.
UniGeneiAt.19208.

3D structure databases

ProteinModelPortaliO22704.
SMRiO22704. Positions 47-96.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi27584. 1 interaction.
IntActiO22704. 1 interaction.
STRINGi3702.AT1G60660.1.

PTM databases

iPTMnetiO22704.

Proteomic databases

PaxDbiO22704.
PRIDEiO22704.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G60660.1; AT1G60660.1; AT1G60660.
GeneIDi842360.
GrameneiAT1G60660.1; AT1G60660.1; AT1G60660.
KEGGiath:AT1G60660.

Organism-specific databases

TAIRiAT1G60660.

Phylogenomic databases

eggNOGiKOG0537. Eukaryota.
COG5274. LUCA.
HOGENOMiHOG000039853.
InParanoidiO22704.
OMAiHNKRNDC.
OrthoDBiEOG09360XGO.
PhylomeDBiO22704.

Miscellaneous databases

PROiO22704.

Gene expression databases

GenevisibleiO22704. AT.

Family and domain databases

Gene3Di3.10.120.10. 1 hit.
InterProiIPR001199. Cyt_B5-like_heme/steroid-bd.
IPR018506. Cyt_B5_heme-BS.
[Graphical view]
PfamiPF00173. Cyt-b5. 1 hit.
[Graphical view]
PRINTSiPR00363. CYTOCHROMEB5.
SMARTiSM01117. Cyt-b5. 1 hit.
[Graphical view]
SUPFAMiSSF55856. SSF55856. 1 hit.
PROSITEiPS00191. CYTOCHROME_B5_1. 1 hit.
PS50255. CYTOCHROME_B5_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCYP5F_ARATH
AccessioniPrimary (citable) accession number: O22704
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 26, 2014
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 127 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.