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Protein

Putative F-box/kelch-repeat protein At1g60570

Gene

At1g60570

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative F-box/kelch-repeat protein At1g60570
Gene namesi
Ordered Locus Names:At1g60570
ORF Names:F8A5.11
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G60570.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 381381Putative F-box/kelch-repeat protein At1g60570PRO_0000283184Add
BLAST

Proteomic databases

PaxDbiO22698.
PRIDEiO22698.

Expressioni

Gene expression databases

GenevisibleiO22698. AT.

Interactioni

Protein-protein interaction databases

BioGridi27576. 3 interactions.
STRINGi3702.AT1G60570.1.

Structurei

3D structure databases

ProteinModelPortaliO22698.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini19 – 6547F-boxPROSITE-ProRule annotationAdd
BLAST
Repeati126 – 16944Kelch 1Add
BLAST
Repeati171 – 21848Kelch 2Add
BLAST
Repeati220 – 26647Kelch 3Add
BLAST
Repeati269 – 31446Kelch 4Add
BLAST

Sequence similaritiesi

Contains 1 F-box domain.PROSITE-ProRule annotation
Contains 4 Kelch repeats.Curated

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO22698.
OMAiVCLRFSH.
OrthoDBiEOG09360GEW.
PhylomeDBiO22698.

Family and domain databases

Gene3Di2.130.10.80. 1 hit.
InterProiIPR001810. F-box_dom.
IPR015916. Gal_Oxidase_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
PF01344. Kelch_1. 2 hits.
[Graphical view]
SMARTiSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O22698-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDDEEPPLK KNKLPVEEPT LIPSLPEELI LSILARVSRL SYRSLSLVCK
60 70 80 90 100
RFHSLLTSGE IYRFRSLSGY TENCLYVCLR FSHTGRSHRW FMLREKNKSS
110 120 130 140 150
GYVLAPIPIS HSPSLHASSI VAVGSKIYKI GGVMDGSSVS ILDCWSHRWL
160 170 180 190 200
EAPSMQMERD RPSANLIDGK IYVTGGCHRG SYNPSKWMEV FDLKTETWEP
210 220 230 240 250
VLCRSDRLTF ESYHERTNNL LVDGKLYIFW ADKGVVYNPK DDTWDSLEVP
260 270 280 290 300
EMDMCLTLFY CCVIENVLYD FFYEELDIKW YDTKARTWRS LLNGMRELHK
310 320 330 340 350
FVRHASVTLA DYGGKMVMFW DKFVASGDGL GFHKTMMWCA MIALERSDSG
360 370 380
EIWGKVEWFG PVLPNQIPLE YAFEYVGSVK V
Length:381
Mass (Da):43,956
Last modified:January 1, 1998 - v1
Checksum:i18B92F84FACFBA96
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002292 Genomic DNA. Translation: AAB71958.1.
CP002684 Genomic DNA. Translation: AEE33699.1.
PIRiA96631.
RefSeqiNP_176257.1. NM_104741.1.
UniGeneiAt.66064.

Genome annotation databases

EnsemblPlantsiAT1G60570.1; AT1G60570.1; AT1G60570.
GeneIDi842352.
GrameneiAT1G60570.1; AT1G60570.1; AT1G60570.
KEGGiath:AT1G60570.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002292 Genomic DNA. Translation: AAB71958.1.
CP002684 Genomic DNA. Translation: AEE33699.1.
PIRiA96631.
RefSeqiNP_176257.1. NM_104741.1.
UniGeneiAt.66064.

3D structure databases

ProteinModelPortaliO22698.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi27576. 3 interactions.
STRINGi3702.AT1G60570.1.

Proteomic databases

PaxDbiO22698.
PRIDEiO22698.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G60570.1; AT1G60570.1; AT1G60570.
GeneIDi842352.
GrameneiAT1G60570.1; AT1G60570.1; AT1G60570.
KEGGiath:AT1G60570.

Organism-specific databases

TAIRiAT1G60570.

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO22698.
OMAiVCLRFSH.
OrthoDBiEOG09360GEW.
PhylomeDBiO22698.

Miscellaneous databases

PROiO22698.

Gene expression databases

GenevisibleiO22698. AT.

Family and domain databases

Gene3Di2.130.10.80. 1 hit.
InterProiIPR001810. F-box_dom.
IPR015916. Gal_Oxidase_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
PF01344. Kelch_1. 2 hits.
[Graphical view]
SMARTiSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFBK24_ARATH
AccessioniPrimary (citable) accession number: O22698
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.