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O22645 (RBS5_FRIAG) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribulose bisphosphate carboxylase small chain 5, chloroplastic

Short name=RuBisCO small subunit 5
EC=4.1.1.39
Gene names
Name:RBCS5
OrganismFritillaria agrestis (Stinkbells)
Taxonomic identifier64177 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaLilialesLiliaceaeFritillaria

Protein attributes

Sequence length179 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity.

Catalytic activity

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.

3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.

Subunit structure

8 large chains + 8 small chains.

Subcellular location

Plastidchloroplast.

Sequence similarities

Belongs to the RuBisCO small chain family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 5959Chloroplast By similarity
Chain60 – 179120Ribulose bisphosphate carboxylase small chain 5, chloroplastic
PRO_0000031503

Sequences

Sequence LengthMass (Da)Tools
O22645 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 25AB0990156155C3

FASTA17919,508
        10         20         30         40         50         60 
MASSATMLSS VATAACAAPA QASMVAPFVG LKSASAFPVT QKTATGLSTL PSNGGRVQCM 

        70         80         90        100        110        120 
KVWPIVGLKK FETLSYLPTL SVESLLKQIE YLIRNGWVPC LEFSLEGFVS RDNNKSPGYY 

       130        140        150        160        170 
DGRYWTMWKL PMFGCTGAAQ VVKEAAECKK EYPAAFIRVI GFDNVRQVQC VSFIVEKPE 

« Hide

References

[1]Panico E., Baysdorfer C.
Submitted (SEP-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF031544 mRNA. Translation: AAB86854.1.

3D structure databases

ProteinModelPortalO22645.
SMRO22645. Positions 61-178.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
[Graphical view]
PfamPF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSPR00152. RUBISCOSMALL.
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRBS5_FRIAG
AccessionPrimary (citable) accession number: O22645
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: October 16, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families