Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

O22415 (O22415_SAMNI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length570 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of the N-glycosidic bond at one specific adenosine on the 28S rRNA. RuleBase RU004915 SAAS SAAS017989

Sequence similarities

Belongs to the ribosome-inactivating protein family. RuleBase RU004915

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2828 Potential EMBL AAC49989.1
Chain29 – 570542 Potential EMBL AAC49989.1
PRO_5000053324
Chain29 – 308280type 2 ribosome-inactivating protein SNAIf, A chain EMBL AAC49989.1
PRO_5000053325
Chain309 – 570262type 2 ribosome-inactivating protein SNAIf, B chain EMBL AAC49989.1
PRO_5000053326

Sequences

Sequence LengthMass (Da)Tools
O22415 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 7D799D3A20764BA6

FASTA57062,752
        10         20         30         40         50         60 
MRVVTKLLYL VVLAICGLGI HGALTHTRVT PPVYPSVSFN LTGADTYGPF LRALQEKVIL 

        70         80         90        100        110        120 
GNHTAFDLPV LNPESQVSDS NRFVLVPLTN PSGDTVTLAI DVVNLYVVAF SSNGRSYFFS 

       130        140        150        160        170        180 
GSTAVQRDNL FVDTTQEELN FTGNYISLER QVGFGRVYIP LGPKSLAQAI SSLRTYTLSA 

       190        200        210        220        230        240 
GDTKPLARGL LVVIQMVSEA ARFRYIELRI RTSITDASEF TPDLLMLSME NNWSSMSSEI 

       250        260        270        280        290        300 
QQAQPGGIFP GVVQLRDERN NPIEVTNFRR LFELTYIAVL LYGCAPVTSN SYTNNAIDAQ 

       310        320        330        340        350        360 
IIKMPVFRGG GYEKVCSVVE VTRRISGWDG LCVDVRDGHY IDGNTVQLGP CGNECNQLWT 

       370        380        390        400        410        420 
FRTDGTIRWL GKCLTTSSSV MIYDCNTVPP EATKWVVSTD GTITNPRSGL VLTAPQAAEG 

       430        440        450        460        470        480 
TALSLENNIH AARQGWTVGD VEPLVTFIVG YKQMCLTENG ENNFVWLEDC VLNRVEQEWA 

       490        500        510        520        530        540 
LYGDGTIRVN SNRSLCVTSE DHEPSDLIVI LKCEGSGNQR WVFNTNGTIS NPNAKLVMDV 

       550        560        570 
AQSNVSLRKI ILYPPTGNPN QQWITTTQPA 

« Hide

References

[1]"Elderberry (Sambucus nigra) contains truncated Neu5Ac(alpha-2,6)Gal/GalNAc-binding type 2 ribosome-inactivating proteins."
Peumans W.J., Roy S., Barre A., Rouge P., van Leuven F., van Damme E.J.
FEBS Lett. 425:35-39(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Fruit EMBL AAC49989.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF012899 mRNA. Translation: AAC49989.1.

3D structure databases

ProteinModelPortalO22415.
SMRO22415. Positions 33-285, 315-566.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.40.420.10. 1 hit.
4.10.470.10. 1 hit.
InterProIPR001574. Ribosome_inactivat_prot.
IPR017988. Ribosome_inactivat_prot_CS.
IPR016138. Ribosome_inactivat_prot_sub1.
IPR016139. Ribosome_inactivat_prot_sub2.
IPR017989. Ribosome_inactivat_prot_subgr.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamPF00652. Ricin_B_lectin. 2 hits.
PF00161. RIP. 1 hit.
[Graphical view]
PRINTSPR00396. SHIGARICIN.
SMARTSM00458. RICIN. 2 hits.
[Graphical view]
SUPFAMSSF50370. SSF50370. 2 hits.
SSF56371. SSF56371. 1 hit.
PROSITEPS50231. RICIN_B_LECTIN. 2 hits.
PS00275. SHIGA_RICIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO22415_SAMNI
AccessionPrimary (citable) accession number: O22415
Entry history
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: April 16, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)