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Protein

Ethylene-responsive transcription factor ERF008

Gene

ERF008

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi27 – 84AP2/ERFPROSITE-ProRule annotationAdd BLAST58

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA binding transcription factor activity Source: TAIR

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processEthylene signaling pathway, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Ethylene-responsive transcription factor ERF008
Gene namesi
Name:ERF008
Ordered Locus Names:At2g23340
ORF Names:T20D16.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G23340
TAIRilocus:2058641 AT2G23340

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002903711 – 176Ethylene-responsive transcription factor ERF008Add BLAST176

Proteomic databases

PaxDbiO22174

Expressioni

Gene expression databases

ExpressionAtlasiO22174 baseline and differential
GenevisibleiO22174 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G23340.1

Structurei

3D structure databases

ProteinModelPortaliO22174
SMRiO22174
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG410JD8P Eukaryota
ENOG41116MV LUCA
HOGENOMiHOG000237624
InParanoidiO22174
OMAiDNCNGVK
OrthoDBiEOG09360TDC
PhylomeDBiO22174

Family and domain databases

CDDicd00018 AP2, 1 hit
Gene3Di3.30.730.10, 1 hit
InterProiView protein in InterPro
IPR001471 AP2/ERF_dom
IPR036955 AP2/ERF_dom_sf
IPR016177 DNA-bd_dom_sf
PfamiView protein in Pfam
PF00847 AP2, 1 hit
PRINTSiPR00367 ETHRSPELEMNT
SMARTiView protein in SMART
SM00380 AP2, 1 hit
SUPFAMiSSF54171 SSF54171, 1 hit
PROSITEiView protein in PROSITE
PS51032 AP2_ERF, 1 hit

Sequencei

Sequence statusi: Complete.

O22174-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METEAAVTAT VTAATMGIGT RKRDLKPYKG IRMRKWGKWV AEIREPNKRS
60 70 80 90 100
RIWLGSYATP EAAARAYDTA VFYLRGPSAR LNFPELLAGL TVSNGGGRGG
110 120 130 140 150
DLSAAYIRRK AAEVGAQVDA LGATVVVNTG GENRGDYEKI ENCRKSGNGS
160 170
LERVDLNKLP DPENSDGDDD ECVKRR
Length:176
Mass (Da):19,120
Last modified:January 1, 1998 - v1
Checksum:i6F8287D1F1555957
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002391 Genomic DNA Translation: AAB87098.1
CP002685 Genomic DNA Translation: AEC07444.1
AK118495 mRNA Translation: BAC43099.1
BT003741 mRNA Translation: AAO39969.1
PIRiT00498
RefSeqiNP_179915.1, NM_127898.5
UniGeneiAt.43320

Genome annotation databases

EnsemblPlantsiAT2G23340.1; AT2G23340.1; AT2G23340
GeneIDi816866
GrameneiAT2G23340.1; AT2G23340.1; AT2G23340
KEGGiath:AT2G23340

Similar proteinsi

Entry informationi

Entry nameiERF08_ARATH
AccessioniPrimary (citable) accession number: O22174
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 12, 2007
Last sequence update: January 1, 1998
Last modified: April 25, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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