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Protein

Probable RuBisCO transcriptional regulator

Gene

rbcR

Organism
Cyanidium caldarium (Red alga)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Trans-acting transcriptional regulator of RuBisCO genes (rbcL and rbcS) expression.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi23 – 42H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Probable RuBisCO transcriptional regulator
Gene namesi
Name:rbcR
Synonyms:ycf30, ycf7
Encoded oniPlastid; Chloroplast
OrganismiCyanidium caldarium (Red alga)
Taxonomic identifieri2771 [NCBI]
Taxonomic lineageiEukaryotaRhodophytaBangiophyceaeCyanidialesCyanidiaceaeCyanidium

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001057701 – 317Probable RuBisCO transcriptional regulatorAdd BLAST317

Structurei

3D structure databases

ProteinModelPortaliO19892
SMRiO19892
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 63HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

O19892-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLPFTLDQ LRILRAILIQ GSFKKAATSL YISQPAVSSH VHNIEKQLNI
60 70 80 90 100
QLFDRSHRNA QLTEAGQLLL KYGGRILALC EETCRALEDL QNLQCGNLII
110 120 130 140 150
GASQTTGTYL MPKLIGLFRQ KYPQISVQLQ VHSTRRISWS VANGQLDLAI
160 170 180 190 200
IGGEVPKELT EILEVRNFVE DELTLILPPS HPFSKFSCIQ KEDLYRLRFI
210 220 230 240 250
ALDKNSTIRK VIDKILNRNG IDSSRLKTEM ELSSIEAIKN AVQSGLGASF
260 270 280 290 300
VSISAIDKEL KLQLLNRVNI DKIKIKRMLS IITNYSRYRS KASETFCHEI
310
LGLLVNLPFK NAPSTEK
Length:317
Mass (Da):35,747
Last modified:January 1, 1998 - v1
Checksum:iC81489C529464FFF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF022186 Genomic DNA Translation: AAB82697.1
PIRiT11960
RefSeqiNP_045064.1, NC_001840.1

Genome annotation databases

GeneIDi800283

Similar proteinsi

Entry informationi

Entry nameiRBCR_CYACA
AccessioniPrimary (citable) accession number: O19892
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

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