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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_Y53C12B.1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

SignaLinkiO18215.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_Y53C12B.1Imported, Y53C12B.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiY53C12B.1; CE14894; WBGene00013143.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

EPDiO18215.
PaxDbiO18215.
PeptideAtlasiO18215.

Expressioni

Gene expression databases

BgeeiWBGene00013143.

Interactioni

Protein-protein interaction databases

STRINGi6239.Y53C12B.1.

Structurei

3D structure databases

ProteinModelPortaliO18215.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini105 – 644WD_REPEATS_REGIONInterPro annotationAdd BLAST540
Repeati105 – 146WDPROSITE-ProRule annotationAdd BLAST42
Repeati408 – 451WDPROSITE-ProRule annotationAdd BLAST44
Repeati473 – 514WDPROSITE-ProRule annotationAdd BLAST42
Repeati519 – 560WDPROSITE-ProRule annotationAdd BLAST42
Repeati561 – 602WDPROSITE-ProRule annotationAdd BLAST42
Repeati603 – 635WDPROSITE-ProRule annotationAdd BLAST33

Keywords - Domaini

RepeatSAAS annotation, WD repeatPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0319. Eukaryota.
ENOG410XPQD. LUCA.
GeneTreeiENSGT00900000140995.
HOGENOMiHOG000016188.
InParanoidiO18215.
KOiK14555.
OMAiDFLWHNM.
OrthoDBiEOG091G029V.
PhylomeDBiO18215.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
2.130.10.10. 3 hits.
InterProiView protein in InterPro
IPR011042. 6-blade_b-propeller_TolB-like.
IPR020472. G-protein_beta_WD-40_rep.
IPR013934. SSU_processome_Utp13.
IPR015943. WD40/YVTN_repeat-like_dom_sf.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
IPR036322. WD40_repeat_dom_sf.
PfamiView protein in Pfam
PF08625. Utp13. 1 hit.
PF00400. WD40. 7 hits.
PRINTSiPR00320. GPROTEINBRPT.
SMARTiView protein in SMART
SM00320. WD40. 12 hits.
SUPFAMiSSF50978. SSF50978. 2 hits.
PROSITEiView protein in PROSITE
PS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.

Sequencei

Sequence statusi: Complete.

O18215-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEPIKEIAA KRSVEAVYTG GTVRWSANGQ KLFSTCTNVV KVIDLADNTA
60 70 80 90 100
SYTIGDPEDE LRITCTAVDK NRNRLLVAYN NQIIREYSIP LDPSTTKPEL
110 120 130 140 150
ARTWKTIHTA PILVMEFNEE GHLLATGSAD HIVKVWNLTE QQCTHTLKGP
160 170 180 190 200
SVVSAILFGK HEKLVVGYIE GQLNLYNIMR GAPKKLVNTW KSHNSHITAL
210 220 230 240 250
LQVPDSRVVV ALSRDQTMSI HETETQETLR VLPLYESIEG GAIGHNGNLF
260 270 280 290 300
TVGEEGVVKE FVIETAKLVR KKRIASSNLD HLAYDVVSNR FLAISAEQNL
310 320 330 340 350
IILDFENLKI ARQIVGFHDE IYSCCLLGKD ESHMAVASNT SEIRLYNTKT
360 370 380 390 400
LDCQLIRGHT ESVLSVVSPT WDTSLLASCS KDNSIIFWRL VTSPENDSCS
410 420 430 440 450
TLVPVAAATG HANTVTALAI SNTGRAPFLA SVSTDCTIKL WGLGVSTKLK
460 470 480 490 500
EVKIDAEKDF VEQLPKLTCS STMVAHGKDV NCVDISESDA LIATGGMDKL
510 520 530 540 550
VKLWQVDTHK MQLGIAGTLS GHRRGVGDVK FAKNSHKLAS CSGDMTIKIW
560 570 580 590 600
NISEKSCLQT ISGHSCAVFR VIFARNDSQL ISADSAGIIK IWTIKTADCE
610 620 630 640 650
CSIDAHTDKI WSLSKNHNES EFVTAGTDGR IVVWKDVTEE KQKAEDNKRR
660 670 680 690 700
EAIEQDQTLT NLLSQKRYSE ALVFALTLAK PFCAFKVINA LMAEETPEEL
710 720 730 740 750
GSAIRRLDTR QIEILLQFTV KWNTNSRTSS VAQRVLYEIV HIVDPEELVS
760 770 780 790
MPGAYGYIES FLPYTQRHMD RLDRAKQDVS LFDFVWRQMR SSV
Length:793
Mass (Da):88,061
Last modified:January 1, 1998 - v1
Checksum:iD0FE57AA34B7B65D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAB16490.1.
PIRiT27133.
RefSeqiNP_496100.1. NM_063699.1.
UniGeneiCel.13957.

Genome annotation databases

EnsemblMetazoaiY53C12B.1; Y53C12B.1; WBGene00013143.
GeneIDi190203.
KEGGicel:CELE_Y53C12B.1.
UCSCiY53C12B.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiO18215_CAEEL
AccessioniPrimary (citable) accession number: O18215
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 22, 2017
This is version 144 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported