O18056 (O18056_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein DDX-19, isoform b EMBL CAA90406.1

Gene names

Name:	ddx-19 WormBase WBGene00011580 WormBase T07D4.4b
ORF Names:	T07D4.4 EMBL CAA90406.1 WormBase WBGene00011580

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	638 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O18056 [UniParc]. Last modified August 1, 1998. Version 2. Checksum: 186AA9583E19ACBE	FASTA	638	69,968
	10 20 30 40 50 60 MADWGIAFDE QCRSEGLEVP EKTEKVQSGS EMDQNEENKG SNGWGISRGG MFGGPKASNA 70 80 90 100 110 120 PPPQTSFGST SGTRVGGSFG GQAGVDGRGA PLGSAEELIG GVPIMPGQSQ PMRGGFQGAY 130 140 150 160 170 180 RGGRGSGGGQ MDFGAPGQGQ SMGRGRGQQN PAFVPRPRDT PPQYGGHQAA QQFVKPDSKY 190 200 210 220 230 240 KFTKPATEEA HEQVPVPADI ALLNKFIQKE VKMMKDVVVD VQRQDPKSPL YSISSFRELR 250 260 270 280 290 300 LKPEVLKALD TMNFQFPTRI QETALPLLLM EPPSNLIAQA QSGTGKTAAF VLTMLCRIDV 310 320 330 340 350 360 NLMCPQCICL APTLELAKQI GEVVEKMGKF IDNLKIHYAI KGGNMAAMRG RKLTEQIVIG 370 380 390 400 410 420 TPGITRDYLQ KYKCIDPSKI RCLVLDEADV MIYHQGFTDI STTIYNMVED ASDSVQSMLF 430 440 450 460 470 480 SATYDEPVIN FATKIIKNAI VVMLKREEQA LPNIKQFYVQ CACRDSKYAA IVNLYSGLAV 490 500 510 520 530 540 ASSVIFCHTK ASVMWLYENM RARGHQVDVL HGDMTVVERA DTIIHFKRGD FKVLITTNVF 550 560 570 580 590 600 ARGIDVAQVS VVINYDLPIK YTDEGTPMVV DGFTQPDCET YLHRIGRTGR FGKTGIAINL 610 620 630 IDSEDSMNMI NVLENHFQMK IARMDPSNLV ELEAIEMA

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z50071 Genomic DNA. Translation: CAA90406.1.
PIR	T24661.
RefSeq	NP_495892.1. NM_063491.3.
UniGene	Cel.7700.
3D structure databases
HSSP	HSSP built from PDB template 1FUK based on UniProtKB P10081.
ProteinModelPortal	O18056.
SMR	O18056. Positions 219-628.
ModBase	Search...
Protein-protein interaction databases
STRING	O18056.
Proteomic databases
PRIDE	O18056.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	T07D4.4b.1; T07D4.4b.1; T07D4.4. T07D4.4b.2; T07D4.4b.2; T07D4.4.
GeneID	174418.
KEGG	cel:T07D4.4.
UCSC	T07D4.4b.1. c. elegans.
Organism-specific databases
CTD	174418.
WormBase	T07D4.4b; CE18220; WBGene00011580; ddx-19.
Phylogenomic databases
eggNOG	meNOG05209.
GeneTree	EMGT00050000002694.
PhylomeDB	O18056.
Gene expression databases
ArrayExpress	O18056.
Family and domain databases
InterPro	IPR014001. DEAD-like_helicase. IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. IPR001650. Helicase_C. IPR014014. RNA_helicase_DEAD_Q_motif. [Graphical view]
Pfam	PF00270. DEAD. 1 hit. PF00271. Helicase_C. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. [Graphical view]
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. PS51195. Q_MOTIF. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	883942.

Entry information

Entry name

O18056_CAEEL

Accession

Primary (citable) accession number: O18056
Secondary accession number(s): Q22309

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	August 1, 1998
Last modified:	January 25, 2012
This is version 90 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)