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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_R17.3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_R17.3Imported, R17.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiR17.3; CE16316; WBGene00011269.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 440421Sequence analysisPRO_5004157485Add
BLAST

Proteomic databases

PaxDbiO18003.

Expressioni

Gene expression databases

BgeeiWBGene00011269.

Structurei

3D structure databases

ProteinModelPortaliO18003.
SMRiO18003. Positions 245-294.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini199 – 24345SMB (somatomedin-B)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IGXF. Eukaryota.
ENOG41118V9. LUCA.
GeneTreeiENSGT00390000008325.
HOGENOMiHOG000021281.
InParanoidiO18003.
OMAiNNICVEC.
OrthoDBiEOG091G06PW.
PhylomeDBiO18003.

Family and domain databases

InterProiIPR001212. Somatomedin_B_dom.
IPR000884. TSP1_rpt.
[Graphical view]
PfamiPF01033. Somatomedin_B. 1 hit.
[Graphical view]
SMARTiSM00209. TSP1. 1 hit.
[Graphical view]
SUPFAMiSSF82895. SSF82895. 1 hit.
SSF90188. SSF90188. 1 hit.
PROSITEiPS00524. SMB_1. 1 hit.
PS50958. SMB_2. 1 hit.
PS50092. TSP1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O18003-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRHFLFVSLV FSIPYTCHAG CYQRRLCCAG RNNTCKGVDD GIAHLPTVST
60 70 80 90 100
IHNEEAQTFH QRPTVRTEKE YYTPHYESSG DGYDLIFPDV FDEESDERIG
110 120 130 140 150
KLVLPDIIEM DGSGADKVYE RYGLGSGDGE PEDVETQEIP LTTPAPRLKT
160 170 180 190 200
LIFGLKRDQR TPPEEITRYS EKPRHLLIRY SLLSKFMPLK VTSTPLLYEE
210 220 230 240 250
NRVQPANNLY YLESSISECY CDEHCVTLGD CCSDYTFVCP PRDCVLTDWD
260 270 280 290 300
SWTQCTADNG TCGIGTQKRL RHVIQHAERG GAACEPLKEM RTCFVECRPK
310 320 330 340 350
KSALDDITTV ALILDYRHNK TRSKIRRNNI YWDLPNVAEK MKKATYYCVH
360 370 380 390 400
YTIDWVNRNC VSRLLNKGLS EGSVMCAECQ PEATYHRNNG RCASDLEDGD
410 420 430 440
QGFWKLIGPQ SCNGIWTRIN RTENCQCQIE YPKDHPFLLV
Length:440
Mass (Da):50,400
Last modified:January 1, 1998 - v1
Checksum:i42820B834F263EE6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAB07269.1.
PIRiT24232.
RefSeqiNP_499387.1. NM_066986.3.
UniGeneiCel.10169.

Genome annotation databases

EnsemblMetazoaiR17.3; R17.3; WBGene00011269.
GeneIDi176513.
KEGGicel:CELE_R17.3.
UCSCiR17.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAB07269.1.
PIRiT24232.
RefSeqiNP_499387.1. NM_066986.3.
UniGeneiCel.10169.

3D structure databases

ProteinModelPortaliO18003.
SMRiO18003. Positions 245-294.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO18003.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiR17.3; R17.3; WBGene00011269.
GeneIDi176513.
KEGGicel:CELE_R17.3.
UCSCiR17.3. c. elegans.

Organism-specific databases

CTDi176513.
WormBaseiR17.3; CE16316; WBGene00011269.

Phylogenomic databases

eggNOGiENOG410IGXF. Eukaryota.
ENOG41118V9. LUCA.
GeneTreeiENSGT00390000008325.
HOGENOMiHOG000021281.
InParanoidiO18003.
OMAiNNICVEC.
OrthoDBiEOG091G06PW.
PhylomeDBiO18003.

Gene expression databases

BgeeiWBGene00011269.

Family and domain databases

InterProiIPR001212. Somatomedin_B_dom.
IPR000884. TSP1_rpt.
[Graphical view]
PfamiPF01033. Somatomedin_B. 1 hit.
[Graphical view]
SMARTiSM00209. TSP1. 1 hit.
[Graphical view]
SUPFAMiSSF82895. SSF82895. 1 hit.
SSF90188. SSF90188. 1 hit.
PROSITEiPS00524. SMB_1. 1 hit.
PS50958. SMB_2. 1 hit.
PS50092. TSP1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO18003_CAEEL
AccessioniPrimary (citable) accession number: O18003
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.