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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F11A5.3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F11A5.3Imported, F11A5.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF11A5.3; CE15781; WBGene00008671.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiO17788.

Expressioni

Gene expression databases

ExpressionAtlasiO17788. baseline.

Interactioni

Protein-protein interaction databases

STRINGi6239.F11A5.3.

Structurei

3D structure databases

ProteinModelPortaliO17788.
SMRiO17788. Positions 5-170.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0098. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00760000118841.
HOGENOMiHOG000233968.
InParanoidiO17788.
OMAiTSAKANK.
OrthoDBiEOG7QK0CV.
PhylomeDBiO17788.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.

Sequencei

Sequence statusi: Complete.

O17788-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYPDHMFKYV IIGDGGVGKS NLLLRFTDEL FDPIHTTTLG VEFGYKDLQI
60 70 80 90 100
DKYKVRLRVW DTCGQENFRS IIRAYYRNAL GALLVYDITC RKSFVHLEQW
110 120 130 140 150
LSDLRQHGHP EMVIMLIGNK SDLKAVRDVT TEEGEAFAKK NGLTFMETSA
160 170 180 190 200
KANKHVEKAF VNTAHEIYKK LKLGVIEDDD VKKKKIGIIL RSRSGKEKKC

C
Length:201
Mass (Da):23,105
Last modified:January 1, 1998 - v1
Checksum:iA36A99607FC4EB1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB07356.1.
PIRiT20749.
RefSeqiNP_507083.1. NM_074682.1.
UniGeneiCel.4154.

Genome annotation databases

EnsemblMetazoaiF11A5.3; F11A5.3; WBGene00008671.
GeneIDi184330.
KEGGicel:CELE_F11A5.3.
UCSCiF11A5.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB07356.1.
PIRiT20749.
RefSeqiNP_507083.1. NM_074682.1.
UniGeneiCel.4154.

3D structure databases

ProteinModelPortaliO17788.
SMRiO17788. Positions 5-170.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F11A5.3.

Proteomic databases

PaxDbiO17788.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF11A5.3; F11A5.3; WBGene00008671.
GeneIDi184330.
KEGGicel:CELE_F11A5.3.
UCSCiF11A5.3. c. elegans.

Organism-specific databases

CTDi184330.
WormBaseiF11A5.3; CE15781; WBGene00008671.

Phylogenomic databases

eggNOGiKOG0098. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00760000118841.
HOGENOMiHOG000233968.
InParanoidiO17788.
OMAiTSAKANK.
OrthoDBiEOG7QK0CV.
PhylomeDBiO17788.

Gene expression databases

ExpressionAtlasiO17788. baseline.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO17788_CAEEL
AccessioniPrimary (citable) accession number: O17788
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: July 6, 2016
This is version 119 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.