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Protein
Submitted name:

Uncharacterized protein

Gene

C55A6.6

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C55A6.6Imported, CELE_C55A6.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC55A6.6; CE09003; WBGene00008335.

PTM / Processingi

Proteomic databases

PaxDbiO17721.

Expressioni

Gene expression databases

BgeeiWBGene00008335.

Interactioni

Protein-protein interaction databases

STRINGi6239.C55A6.6.2.

Structurei

3D structure databases

ProteinModelPortaliO17721.
SMRiO17721. Positions 1-250.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the short-chain dehydrogenases/reductases (SDR) family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1611. Eukaryota.
ENOG4111VKY. LUCA.
GeneTreeiENSGT00510000048108.
InParanoidiO17721.
OMAiITENTTG.
OrthoDBiEOG091G0K37.
PhylomeDBiO17721.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

O17721-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPKSVVITG ANRGIGLGLV QEFVKDKNIL HIIATVRDVE KATDLKAIND
60 70 80 90 100
PHVHVLPLIV TCDKSIDSFV TKVEEIVGSD GLNLLVNNAG IAVKYLTKTK
110 120 130 140 150
PNRSMIAEQL DVNTTSVVIL TQKLLPLLTR AASKVSGDQL SVSRAAVITI
160 170 180 190 200
SSGLGSITEN TTGSAVFDSL AYRMSKAAVN MFGRTLAIDL QDDHILVVNF
210 220 230 240 250
CPGWVQTDMG GQEAMLTVEQ STSELVSSFN KLDNSHNGRY FQRNLTPFQF
Length:250
Mass (Da):27,060
Last modified:January 1, 1998 - v1
Checksum:i95A2C768163B82CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02866.1.
PIRiT20258.
RefSeqiNP_505920.1. NM_073519.4.
UniGeneiCel.34352.

Genome annotation databases

EnsemblMetazoaiC55A6.6; C55A6.6; WBGene00008335.
GeneIDi183835.
KEGGicel:CELE_C55A6.6.
UCSCiC55A6.6. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02866.1.
PIRiT20258.
RefSeqiNP_505920.1. NM_073519.4.
UniGeneiCel.34352.

3D structure databases

ProteinModelPortaliO17721.
SMRiO17721. Positions 1-250.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C55A6.6.2.

Proteomic databases

PaxDbiO17721.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC55A6.6; C55A6.6; WBGene00008335.
GeneIDi183835.
KEGGicel:CELE_C55A6.6.
UCSCiC55A6.6. c. elegans.

Organism-specific databases

CTDi183835.
WormBaseiC55A6.6; CE09003; WBGene00008335.

Phylogenomic databases

eggNOGiKOG1611. Eukaryota.
ENOG4111VKY. LUCA.
GeneTreeiENSGT00510000048108.
InParanoidiO17721.
OMAiITENTTG.
OrthoDBiEOG091G0K37.
PhylomeDBiO17721.

Gene expression databases

BgeeiWBGene00008335.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO17721_CAEEL
AccessioniPrimary (citable) accession number: O17721
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.