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Protein
Submitted name:

C-type LECtin

Gene

clec-11

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

LectinImported

Names & Taxonomyi

Protein namesi
Submitted name:
C-type LECtinImported
Gene namesi
Name:clec-11Imported
ORF Names:C54C8.7Imported, CELE_C54C8.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiC54C8.7; CE08970; WBGene00008294; clec-11.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500415746423 – 417Sequence analysisAdd BLAST395

Proteomic databases

PaxDbiO17705.

Expressioni

Gene expression databases

BgeeiWBGene00008294.

Structurei

3D structure databases

ProteinModelPortaliO17705.
SMRiO17705.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 147C-type lectinInterPro annotationAdd BLAST115
Domaini166 – 279C-type lectinInterPro annotationAdd BLAST114
Domaini305 – 413CUBInterPro annotationAdd BLAST109

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IS1I. Eukaryota.
ENOG410ZPMY. LUCA.
GeneTreeiENSGT00440000034850.
HOGENOMiHOG000016317.
InParanoidiO17705.
OMAiLEANACC.
OrthoDBiEOG091G0DF7.
PhylomeDBiO17705.

Family and domain databases

CDDicd00041. CUB. 1 hit.
Gene3Di2.60.120.290. 1 hit.
3.10.100.10. 2 hits.
InterProiIPR001304. C-type_lectin-like.
IPR016186. C-type_lectin-like/link.
IPR016187. CTDL_fold.
IPR000859. CUB_dom.
[Graphical view]
PfamiPF00431. CUB. 1 hit.
PF00059. Lectin_C. 2 hits.
[Graphical view]
SMARTiSM00034. CLECT. 2 hits.
SM00042. CUB. 1 hit.
[Graphical view]
SUPFAMiSSF49854. SSF49854. 1 hit.
SSF56436. SSF56436. 2 hits.
PROSITEiPS50041. C_TYPE_LECTIN_2. 2 hits.
PS01180. CUB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O17705-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTVAALLFL FTCLESFESS SATPVCTNGF TLINNKCLKL LNTPVNHKAA
60 70 80 90 100
EISCSSFGAT LVTVKNDHDN QAIATIVGSS TPLVWLGLYC FSSNSSQCLW
110 120 130 140 150
DDESGSARSY NNFSSGFPLV ALGQCVYYST QGALTGKWLS AECESQRMAF
160 170 180 190 200
VCELPTTFAD NCLHNYNGYC YTFSSSPQTF IGAQSTCAQT CGNLASVHSP
210 220 230 240 250
NENRYITTFA PQDYYYIGAI WKTDYSLRWM DGSAWDYNNI DPIYPNRYNY
260 270 280 290 300
CLHMSTITTS GSGFWYGDDC SLSRKYVCKR EAGVPCTTVP PPVTVRPSST
310 320 330 340 350
NPSNCNAGLL MSPGVFTSPN YPQNYFNNEN CTYQLSTLGS YRITLKFSNF
360 370 380 390 400
RTESNYDFVS VYDGPTTSSP SLGRYSGNIG SFYVSSSENN MLVTFTSDAG
410
VVFQGFTARF YSVVHRS
Length:417
Mass (Da):46,009
Last modified:January 1, 1998 - v1
Checksum:i914E46EF20CE01B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAB05461.1.
PIRiT20199.
RefSeqiNP_493162.1. NM_060761.1.
UniGeneiCel.19062.

Genome annotation databases

EnsemblMetazoaiC54C8.7; C54C8.7; WBGene00008294.
GeneIDi183773.
KEGGicel:CELE_C54C8.7.
UCSCiC54C8.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAB05461.1.
PIRiT20199.
RefSeqiNP_493162.1. NM_060761.1.
UniGeneiCel.19062.

3D structure databases

ProteinModelPortaliO17705.
SMRiO17705.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO17705.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC54C8.7; C54C8.7; WBGene00008294.
GeneIDi183773.
KEGGicel:CELE_C54C8.7.
UCSCiC54C8.7. c. elegans.

Organism-specific databases

CTDi183773.
WormBaseiC54C8.7; CE08970; WBGene00008294; clec-11.

Phylogenomic databases

eggNOGiENOG410IS1I. Eukaryota.
ENOG410ZPMY. LUCA.
GeneTreeiENSGT00440000034850.
HOGENOMiHOG000016317.
InParanoidiO17705.
OMAiLEANACC.
OrthoDBiEOG091G0DF7.
PhylomeDBiO17705.

Gene expression databases

BgeeiWBGene00008294.

Family and domain databases

CDDicd00041. CUB. 1 hit.
Gene3Di2.60.120.290. 1 hit.
3.10.100.10. 2 hits.
InterProiIPR001304. C-type_lectin-like.
IPR016186. C-type_lectin-like/link.
IPR016187. CTDL_fold.
IPR000859. CUB_dom.
[Graphical view]
PfamiPF00431. CUB. 1 hit.
PF00059. Lectin_C. 2 hits.
[Graphical view]
SMARTiSM00034. CLECT. 2 hits.
SM00042. CUB. 1 hit.
[Graphical view]
SUPFAMiSSF49854. SSF49854. 1 hit.
SSF56436. SSF56436. 2 hits.
PROSITEiPS50041. C_TYPE_LECTIN_2. 2 hits.
PS01180. CUB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO17705_CAEEL
AccessioniPrimary (citable) accession number: O17705
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 30, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.