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Protein
Submitted name:

Uncharacterized protein

Gene

C53A5.11

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C53A5.11Imported, CELE_C53A5.11Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC53A5.11; CE08960; WBGene00008269.

PTM / Processingi

Proteomic databases

PaxDbiO17702.
PRIDEiO17702.

Structurei

3D structure databases

ProteinModelPortaliO17702.
SMRiO17702. Positions 156-429.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Kelch repeatSAAS annotation

Phylogenomic databases

eggNOGiKOG4441. Eukaryota.
ENOG410XNX8. LUCA.
GeneTreeiENSGT00760000119153.
HOGENOMiHOG000114027.
InParanoidiO17702.
OMAiTSACIHE.
PhylomeDBiO17702.

Family and domain databases

Gene3Di2.120.10.80. 1 hit.
2.130.10.80. 1 hit.
InterProiIPR011043. Gal_Oxase/kelch_b-propeller.
IPR015916. Gal_Oxidase_b-propeller.
IPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF01344. Kelch_1. 4 hits.
[Graphical view]
SMARTiSM00612. Kelch. 4 hits.
[Graphical view]
SUPFAMiSSF50965. SSF50965. 1 hit.

Sequencei

Sequence statusi: Complete.

O17702-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNHEMNTKFY INLMLARFVI SAFSALKDSS ITSLGIPRHR QGIIGVEKMT
60 70 80 90 100
NHIFSDSESD RESGASEFDY HSDSQSEETQ HPKAIEMRNQ FRNTTENLIQ
110 120 130 140 150
TLQMFFGILS FELYEGKDNL KCITMIHDIT SLMEVADTKL KNYINTLNSK
160 170 180 190 200
EQIFMVDDGV LNMDPILVAD RKQNSREPLF IGYFKPDTMS FMPIGRLPNP
210 220 230 240 250
KSHYAVVSSS TKVFIIGGMN NGTYLNRVEM FDKEKGIRVE CTRLMHGRTR
260 270 280 290 300
TSACIHEDAI YAVGGYDATY MSSVEIYDIK TGGDWTTGPS LNNRRADASV
310 320 330 340 350
VSFYGQLFVL GGFNGKDYEE TIEKLSDSKD KFEVCGNMVG RAGFGACVFR
360 370 380 390 400
GRIYVAGGWN TPCNTLKTFQ SYDPLTNTWK DEPSMNTGRK YFKLHATNEA
410 420 430
IYAIRGCSHD WDLIKETERF DPQTLTWATS
Length:430
Mass (Da):48,768
Last modified:January 1, 1998 - v1
Checksum:i46576BACAD2BE420
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB03991.1.
PIRiT20170.
RefSeqiNP_506607.1. NM_074206.1.
UniGeneiCel.26183.

Genome annotation databases

EnsemblMetazoaiC53A5.11; C53A5.11; WBGene00008269.
GeneIDi183741.
KEGGicel:CELE_C53A5.11.
UCSCiC53A5.11. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB03991.1.
PIRiT20170.
RefSeqiNP_506607.1. NM_074206.1.
UniGeneiCel.26183.

3D structure databases

ProteinModelPortaliO17702.
SMRiO17702. Positions 156-429.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO17702.
PRIDEiO17702.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC53A5.11; C53A5.11; WBGene00008269.
GeneIDi183741.
KEGGicel:CELE_C53A5.11.
UCSCiC53A5.11. c. elegans.

Organism-specific databases

CTDi183741.
WormBaseiC53A5.11; CE08960; WBGene00008269.

Phylogenomic databases

eggNOGiKOG4441. Eukaryota.
ENOG410XNX8. LUCA.
GeneTreeiENSGT00760000119153.
HOGENOMiHOG000114027.
InParanoidiO17702.
OMAiTSACIHE.
PhylomeDBiO17702.

Miscellaneous databases

NextBioi922192.

Family and domain databases

Gene3Di2.120.10.80. 1 hit.
2.130.10.80. 1 hit.
InterProiIPR011043. Gal_Oxase/kelch_b-propeller.
IPR015916. Gal_Oxidase_b-propeller.
IPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF01344. Kelch_1. 4 hits.
[Graphical view]
SMARTiSM00612. Kelch. 4 hits.
[Graphical view]
SUPFAMiSSF50965. SSF50965. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO17702_CAEEL
AccessioniPrimary (citable) accession number: O17702
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: May 11, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.