Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

C53A5.9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C53A5.9Imported, CELE_C53A5.9Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC53A5.9; CE47626; WBGene00008267.

PTM / Processingi

Proteomic databases

PaxDbiO17700.
PRIDEiO17700.

Interactioni

Protein-protein interaction databases

STRINGi6239.C53A5.9.

Structurei

3D structure databases

ProteinModelPortaliO17700.
SMRiO17700. Positions 163-421.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Kelch repeatSAAS annotation

Phylogenomic databases

eggNOGiKOG4441. Eukaryota.
ENOG410XNX8. LUCA.
GeneTreeiENSGT00760000119153.
HOGENOMiHOG000114027.
InParanoidiO17700.

Family and domain databases

Gene3Di2.130.10.80. 1 hit.
InterProiIPR015916. Gal_Oxidase_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF01344. Kelch_1. 5 hits.
[Graphical view]
SMARTiSM00612. Kelch. 5 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O17700-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFLSSVILP SHTKNASQSV TALDELKTPS SEVADAWDVC DQPLEYQDAQ
60 70 80 90 100
FSESEMETQM KELEDCSIEA SRVFLENLQK SFKLMKLLQL TQSLNPQESS
110 120 130 140 150
YNRKIISTEM KKINDTVSQL KYAGKRIEMI NEHLEKHRFT GKDGDAFLEP
160 170 180 190 200
NMDPVLIADQ AQSAHKPLLI GSFDPKTQKY KPIGRLPDPR ANFAVASSKT
210 220 230 240 250
NLYVIGGTHN GQFLNKFEYY NQKKNARCMG ANLNHKRTKP AAGFHNGALY
260 270 280 290 300
VVGGYDSIYL SSVELYDLEE GTWKNGPSLN NCRANAAVVA CYGEIFVLGG
310 320 330 340 350
FNGKSNEESI EKISASGNEF EIFGEMEGGR SGFGACVFQG RIYIAGGWSN
360 370 380 390 400
TRNTLKSVRS YDPYTKTWRD EPSMKNARKA FTLHATNEAI YAIRGYDEES
410 420 430 440
ALLDQIERFD PKKLKWSIVP SKPHVPPTSY NYEKYYAEMS DNYSK
Length:445
Mass (Da):50,107
Last modified:July 11, 2012 - v2
Checksum:i8A30F4905E47D0FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB03989.2.
PIRiT20168.
RefSeqiNP_506605.2. NM_074204.2.
UniGeneiCel.26181.

Genome annotation databases

EnsemblMetazoaiC53A5.9; C53A5.9; WBGene00008267.
GeneIDi183739.
KEGGicel:CELE_C53A5.9.
UCSCiC53A5.9. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB03989.2.
PIRiT20168.
RefSeqiNP_506605.2. NM_074204.2.
UniGeneiCel.26181.

3D structure databases

ProteinModelPortaliO17700.
SMRiO17700. Positions 163-421.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C53A5.9.

Proteomic databases

PaxDbiO17700.
PRIDEiO17700.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC53A5.9; C53A5.9; WBGene00008267.
GeneIDi183739.
KEGGicel:CELE_C53A5.9.
UCSCiC53A5.9. c. elegans.

Organism-specific databases

CTDi183739.
WormBaseiC53A5.9; CE47626; WBGene00008267.

Phylogenomic databases

eggNOGiKOG4441. Eukaryota.
ENOG410XNX8. LUCA.
GeneTreeiENSGT00760000119153.
HOGENOMiHOG000114027.
InParanoidiO17700.

Miscellaneous databases

NextBioi922184.

Family and domain databases

Gene3Di2.130.10.80. 1 hit.
InterProiIPR015916. Gal_Oxidase_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF01344. Kelch_1. 5 hits.
[Graphical view]
SMARTiSM00612. Kelch. 5 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO17700_CAEEL
AccessioniPrimary (citable) accession number: O17700
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: July 11, 2012
Last modified: May 11, 2016
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.