Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

RAP homolog (Vertebrate Rap GTPase family)

Gene

rap-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • collagen and cuticulin-based cuticle development Source: WormBase
  • epidermis development Source: WormBase
  • small GTPase mediated signal transduction Source: InterPro
Complete GO annotation...

Keywords - Ligandi

GTP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
RAP homolog (Vertebrate Rap GTPase family)Imported
Gene namesi
Name:rap-2Imported
ORF Names:C25D7.7Imported, CELE_C25D7.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC25D7.7; CE35831; WBGene00004308; rap-2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiO17599.
PaxDbiO17599.
PRIDEiO17599.

Interactioni

Protein-protein interaction databases

STRINGi6239.C25D7.7.

Structurei

3D structure databases

ProteinModelPortaliO17599.
SMRiO17599. Positions 1-166.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0395. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00780000121857.
HOGENOMiHOG000233973.
InParanoidiO17599.
OMAiWGCPFLE.
OrthoDBiEOG7QVM41.
PhylomeDBiO17599.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
IPR020849. Small_GTPase_Ras.
[Graphical view]
PANTHERiPTHR24070. PTHR24070. 1 hit.
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51421. RAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O17599-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MREFKVVVLG SGGVGKSALT VQFVSSTFIE KYDPTIEDFY RKEIEVDGQP
60 70 80 90 100
SVLEILDTAG TEQFSSMRDL YIKNGQGFVV VYSITSQQTF HDIRNMKEQI
110 120 130 140 150
VRVKGSENVP ILLVGNKCDL SHQRQVRSEE GLALAESWSC PFTECSAKNN
160 170 180
QNVNVTFAEI VREMNYVQNK SRQSKSCCSL M
Length:181
Mass (Da):20,393
Last modified:July 5, 2004 - v2
Checksum:i562359400AA03BA1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02777.2.
PIRiT19453.
RefSeqiNP_506707.2. NM_074306.2.
UniGeneiCel.4681.

Genome annotation databases

EnsemblMetazoaiC25D7.7; C25D7.7; WBGene00004308.
GeneIDi180011.
KEGGicel:CELE_C25D7.7.
UCSCiC25D7.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02777.2.
PIRiT19453.
RefSeqiNP_506707.2. NM_074306.2.
UniGeneiCel.4681.

3D structure databases

ProteinModelPortaliO17599.
SMRiO17599. Positions 1-166.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C25D7.7.

Proteomic databases

EPDiO17599.
PaxDbiO17599.
PRIDEiO17599.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC25D7.7; C25D7.7; WBGene00004308.
GeneIDi180011.
KEGGicel:CELE_C25D7.7.
UCSCiC25D7.7. c. elegans.

Organism-specific databases

CTDi180011.
WormBaseiC25D7.7; CE35831; WBGene00004308; rap-2.

Phylogenomic databases

eggNOGiKOG0395. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00780000121857.
HOGENOMiHOG000233973.
InParanoidiO17599.
OMAiWGCPFLE.
OrthoDBiEOG7QVM41.
PhylomeDBiO17599.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
IPR020849. Small_GTPase_Ras.
[Graphical view]
PANTHERiPTHR24070. PTHR24070. 1 hit.
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiPS51421. RAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO17599_CAEEL
AccessioniPrimary (citable) accession number: O17599
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: July 5, 2004
Last modified: July 6, 2016
This is version 122 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.