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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F52H2.7

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F52H2.7Imported, F52H2.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiF52H2.7; CE31179; WBGene00018719.

PTM / Processingi

Proteomic databases

PaxDbiO17398.
PRIDEiO17398.

Structurei

3D structure databases

ProteinModelPortaliO17398.
SMRiO17398. Positions 11-124.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini13 – 9886C2InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 C2 domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG1031. Eukaryota.
ENOG410XQDE. LUCA.
GeneTreeiENSGT00390000000212.
HOGENOMiHOG000016599.
InParanoidiO17398.
OMAiHAHIILL.
OrthoDBiEOG715Q38.
PhylomeDBiO17398.

Family and domain databases

Gene3Di2.60.40.150. 1 hit.
InterProiIPR000008. C2_dom.
[Graphical view]
PfamiPF00168. C2. 1 hit.
[Graphical view]
SMARTiSM00239. C2. 1 hit.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 1 hit.
PROSITEiPS50004. C2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O17398-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLIPVCNERL PVRLEICVIS AKALPVMNKS INSTDAFVEV RFLETIDKTD
60 70 80 90 100
VVTSLNPVWN SEQFVFDTDE RELTEEWLQL RVMDHDTYSA NDAIGRVNID
110 120 130 140 150
CNIFMERMRM AKTEVLDETF SFKVYDTIYG NRGELTISVK MHLLMQYNPK
160 170 180 190 200
NYVHIISTTS IPTGLRISDI FGLVDHIRCE KDPDYEWLDK IRTPRATNEA
210 220 230 240 250
RQNAIRVTMR DSIMGIAQKA YKMGGNAIFG LQEYVDMEGS ASDLLTCRLI
260 270 280 290 300
GTCAKIVHES CVPLRYGKPA KPIFTIDKLP GERQIGLGSL LTSRSIKLLN
310 320 330 340 350
EDEDPESVRR SYWVSLRAEI FQQARSIGCN LIIGYTEAVN VNEGVALLTC
360 370 380 390 400
TGTAVMMSDG SETFGMNYAA NDTSARNSPV VVRESVEKEN KERKALFKFN
410 420 430 440 450
GSEGREKRSD SAPRAFRCNQ FHSPSHETKY HSPSKVLPCS YCKKKTFTVK
460 470 480 490 500
TDCEFLPLFD RKIKQFHTNS GKGKFAEFAV FQACRILKCL IKILFSTKGF
510 520 530 540 550
DKKLNERKLS IVFVHVLFKR IRRKIKPWTI QNYPDQKHDF QHFQLNKLNG
560 570 580 590 600
LVSEFILSTQ QCPPPQYYAG PRNFIQVSVC KKISSDPNET ADYASDIGNA
610 620 630 640 650
LPYSDHELIG NLLTEAKSVY PLGNAIFALD ITNAVCDDSL VCIITGVLVR
660 670 680 690 700
LLVIQKADAA SPSISNVLSF SSLQRQHDAR RFSWGTVRDA IRFKPTVQSN
710 720 730 740 750
LTLKILNIKQ GVDDNNSSSA KSRLRLNTIV DKVRRKQHKE YVSHVVFERH
760 770 780 790 800
MSLSIGIHEN QSAGNATSIA GVHLSNSLYP QFVNKDVIEG MLPVARFSDV
810 820 830 840 850
FVREDLTTAV RDSTTVDGFV TSALEERITT IKSILSLGGS NAVVANMRIS
860 870
CPQFNVSKEH AHIILLVSVD FYTVP
Length:875
Mass (Da):98,599
Last modified:October 1, 2002 - v3
Checksum:i665D4BB23769C900
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD71662.1.
PIRiT32482.
RefSeqiNP_508464.2. NM_076063.5.
UniGeneiCel.17248.

Genome annotation databases

EnsemblMetazoaiF52H2.7; F52H2.7; WBGene00018719.
GeneIDi180558.
KEGGicel:CELE_F52H2.7.
UCSCiF52H2.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD71662.1.
PIRiT32482.
RefSeqiNP_508464.2. NM_076063.5.
UniGeneiCel.17248.

3D structure databases

ProteinModelPortaliO17398.
SMRiO17398. Positions 11-124.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO17398.
PRIDEiO17398.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF52H2.7; F52H2.7; WBGene00018719.
GeneIDi180558.
KEGGicel:CELE_F52H2.7.
UCSCiF52H2.7. c. elegans.

Organism-specific databases

CTDi180558.
WormBaseiF52H2.7; CE31179; WBGene00018719.

Phylogenomic databases

eggNOGiKOG1031. Eukaryota.
ENOG410XQDE. LUCA.
GeneTreeiENSGT00390000000212.
HOGENOMiHOG000016599.
InParanoidiO17398.
OMAiHAHIILL.
OrthoDBiEOG715Q38.
PhylomeDBiO17398.

Family and domain databases

Gene3Di2.60.40.150. 1 hit.
InterProiIPR000008. C2_dom.
[Graphical view]
PfamiPF00168. C2. 1 hit.
[Graphical view]
SMARTiSM00239. C2. 1 hit.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 1 hit.
PROSITEiPS50004. C2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO17398_CAEEL
AccessioniPrimary (citable) accession number: O17398
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: October 1, 2002
Last modified: June 8, 2016
This is version 111 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.