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Protein
Submitted name:

Nuclear transcription Factor Y, B (Beta) subunit

Gene

nfyb-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear transcription Factor Y, B (Beta) subunitImported
Gene namesi
Name:nfyb-1Imported
ORF Names:CELE_W10D9.4Imported, W10D9.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiW10D9.4a; CE14792; WBGene00021132; nfyb-1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

EPDiO17286.
PaxDbiO17286.
PeptideAtlasiO17286.

Expressioni

Gene expression databases

BgeeiWBGene00021132.
ExpressionAtlasiO17286. baseline.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

DIPiDIP-25261N.
IntActiO17286. 14 interactors.
MINTiMINT-1048257.
STRINGi6239.W10D9.4.

Structurei

3D structure databases

ProteinModelPortaliO17286.
SMRiO17286.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 129CBFD_NFYB_HMFInterPro annotationAdd BLAST65

Phylogenomic databases

eggNOGiKOG0869. Eukaryota.
COG2036. LUCA.
GeneTreeiENSGT00550000074689.
InParanoidiO17286.
OrthoDBiEOG091G0Y4D.

Family and domain databases

InterProiView protein in InterPro
IPR003958. CBFA_NFYB_domain.
IPR009072. Histone-fold.
PfamiView protein in Pfam
PF00808. CBFD_NFYB_HMF. 1 hit.
SUPFAMiSSF47113. SSF47113. 1 hit.

Sequencei

Sequence statusi: Complete.

O17286-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPKPINEGM LLEDHDHGMP EEEEITEDDM NGIHNIEEDT RTISEIAMEL
60 70 80 90 100
HHPNKSQVLL DQERFLPIAN VVRIMKTQMD PQAKLAKDAK ECAQECVSEF
110 120 130 140 150
ISFIASEAAE ICNITKRKTI TADDLLTAME ATGFDNYAEP MRIFLQKYRQ
160 170 180 190 200
AHKITGPIHR THPDYVRPPQ FQMDPFVRPL FFDTEQGRRC TETQYVINGS
210 220 230 240 250
EIVKNAPLGE EWNEQTGTLN TRADGYYMEE PMEPMPMEEV EIEEHEEIIE
260 270 280 290 300
QDSLGAIALE QQGQMQIYVD PKTKQHFAAK ETPNGMELYP LIIQDTPLQL
310 320 330 340 350
ENVSGPNQFV MNMPDGRAIP HGMGQEEPQP VSSSSVMRKI GQNPSSYAQQ
360 370 380 390 400
HHHVSHVEQH DDVEYEEEEE VDQVEEDTVP VPIAPRPAAT RVQPKRTPTK

RKK
Length:403
Mass (Da):46,062
Last modified:January 1, 1998 - v1
Checksum:i72724FFCD9DA89FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD65581.1.
PIRiE88021.
RefSeqiNP_493740.1. NM_061339.4.
UniGeneiCel.6799.

Genome annotation databases

EnsemblMetazoaiW10D9.4; W10D9.4; WBGene00021132.
GeneIDi173435.
KEGGicel:CELE_W10D9.4.
UCSCiW10D9.4. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiO17286_CAEEL
AccessioniPrimary (citable) accession number: O17286
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: August 30, 2017
This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported