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Protein
Submitted name:

Mitochondrial Ribosomal Protein, Small

Gene

mrps-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: UniProtKB

GO - Biological processi

  • mitochondrial translation Source: UniProtKB
  • translation Source: GO_Central
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Mitochondrial Ribosomal Protein, SmallImported
Gene namesi
Name:mrps-2Imported
ORF Names:CELE_T23B12.3Imported, T23B12.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiT23B12.3; CE14030; WBGene00020718; mrps-2.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial small ribosomal subunit Source: UniProtKB
Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiO17004.
PaxDbiO17004.

Expressioni

Gene expression databases

BgeeiWBGene00020718.

Interactioni

Protein-protein interaction databases

STRINGi6239.T23B12.3.1.

Structurei

3D structure databases

ProteinModelPortaliO17004.
SMRiO17004. Positions 56-259.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0832. Eukaryota.
COG0052. LUCA.
GeneTreeiENSGT00390000017382.
HOGENOMiHOG000071892.
InParanoidiO17004.
KOiK02967.
OMAiTARDCGE.
OrthoDBiEOG091G0NYD.
PhylomeDBiO17004.

Family and domain databases

CDDicd01425. RPS2. 1 hit.
HAMAPiMF_00291_B. Ribosomal_S2_B. 1 hit.
InterProiIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiPF00318. Ribosomal_S2. 2 hits.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.

Sequencei

Sequence statusi: Complete.

O17004-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRVVAAAIR TERAFSTRFS ASQQKPVAST SSSSSVPDRA TLEKGTVQPT
60 70 80 90 100
VLKPFVSASL QHEDLFNFEK MVHIDEMFKA RLHYGHKVGT VNNNMKWALY
110 120 130 140 150
GERLGVCLFD LDITKKYLVR ALNFVAHVSL RGGMILFVTS NRDTMFDVEK
160 170 180 190 200
AADEVGQYSH VRKWQSGTLT NTRQLLGASV RLPDAVCFLS TLTSLGENHP
210 220 230 240 250
AIVEAAKMAI PTIGVVDSNS DPAYLTYLVP ANDDTPQSTE YLLRMFKEAV
260
RKGQEERKRQ QQGK
Length:264
Mass (Da):29,500
Last modified:January 1, 1998 - v1
Checksum:i663407D5AEFABAAE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD72915.1.
PIRiT32224.
RefSeqiNP_505180.1. NM_072779.4.
UniGeneiCel.2201.

Genome annotation databases

EnsemblMetazoaiT23B12.3.1; T23B12.3.1; WBGene00020718.
T23B12.3.2; T23B12.3.2; WBGene00020718.
GeneIDi179229.
KEGGicel:CELE_T23B12.3.
UCSCiT23B12.3.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD72915.1.
PIRiT32224.
RefSeqiNP_505180.1. NM_072779.4.
UniGeneiCel.2201.

3D structure databases

ProteinModelPortaliO17004.
SMRiO17004. Positions 56-259.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.T23B12.3.1.

Proteomic databases

EPDiO17004.
PaxDbiO17004.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT23B12.3.1; T23B12.3.1; WBGene00020718.
T23B12.3.2; T23B12.3.2; WBGene00020718.
GeneIDi179229.
KEGGicel:CELE_T23B12.3.
UCSCiT23B12.3.1. c. elegans.

Organism-specific databases

CTDi179229.
WormBaseiT23B12.3; CE14030; WBGene00020718; mrps-2.

Phylogenomic databases

eggNOGiKOG0832. Eukaryota.
COG0052. LUCA.
GeneTreeiENSGT00390000017382.
HOGENOMiHOG000071892.
InParanoidiO17004.
KOiK02967.
OMAiTARDCGE.
OrthoDBiEOG091G0NYD.
PhylomeDBiO17004.

Gene expression databases

BgeeiWBGene00020718.

Family and domain databases

CDDicd01425. RPS2. 1 hit.
HAMAPiMF_00291_B. Ribosomal_S2_B. 1 hit.
InterProiIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiPF00318. Ribosomal_S2. 2 hits.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO17004_CAEEL
AccessioniPrimary (citable) accession number: O17004
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: September 7, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.