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Protein
Submitted name:

DeHydrogenases, Short chain

Gene

dhs-13

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

ReactomeiR-CEL-5365859. RA biosynthesis pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
DeHydrogenases, Short chainImported
Gene namesi
Name:dhs-13Imported
ORF Names:CELE_F36H9.3Imported, F36H9.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF36H9.3; CE09969; WBGene00000976; dhs-13.

PTM / Processingi

Proteomic databases

EPDiO16619.
PaxDbiO16619.
PeptideAtlasiO16619.

Expressioni

Gene expression databases

BgeeiWBGene00000976.

Interactioni

Protein-protein interaction databases

STRINGi6239.F36H9.3.

Structurei

3D structure databases

ProteinModelPortaliO16619.
SMRiO16619.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0725. Eukaryota.
COG1028. LUCA.
GeneTreeiENSGT00760000118868.
InParanoidiO16619.
KOiK11147.
OMAiMERAIFR.
OrthoDBiEOG091G0G3R.
PhylomeDBiO16619.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

O16619-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASPATKFLT DRVALVTAST KGIGFAIAKQ LGAAGASVVV CSRKKENVDE
60 70 80 90 100
AVAALRLENI DAHGTTAHVG NKSDRTKLID FTLDRFTKLD ILVSNAAVNP
110 120 130 140 150
HYGDLMKVTD SQWDKLLDLN VKSAFELTKE AVPHLEASGR GNVVFVSSVA
160 170 180 190 200
GYSPMNEIGA YSVMKTTLTG LSKSLALNLA RRNIRVNSIA PGIIQTDFSQ
210 220 230 240 250
VLFSDESEKQ KWLSQIAQRR FGDPDECAEA VAFLVSDEAS YISGETIGIN

GGMHARI
Length:257
Mass (Da):27,617
Last modified:January 1, 1998 - v1
Checksum:iFBF35EDE9DEBEE1F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD70642.1.
PIRiT32002.
RefSeqiNP_503501.1. NM_071100.1.
UniGeneiCel.3694.

Genome annotation databases

EnsemblMetazoaiF36H9.3; F36H9.3; WBGene00000976.
GeneIDi178658.
KEGGicel:CELE_F36H9.3.
UCSCiF36H9.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD70642.1.
PIRiT32002.
RefSeqiNP_503501.1. NM_071100.1.
UniGeneiCel.3694.

3D structure databases

ProteinModelPortaliO16619.
SMRiO16619.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F36H9.3.

Proteomic databases

EPDiO16619.
PaxDbiO16619.
PeptideAtlasiO16619.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF36H9.3; F36H9.3; WBGene00000976.
GeneIDi178658.
KEGGicel:CELE_F36H9.3.
UCSCiF36H9.3. c. elegans.

Organism-specific databases

CTDi178658.
WormBaseiF36H9.3; CE09969; WBGene00000976; dhs-13.

Phylogenomic databases

eggNOGiKOG0725. Eukaryota.
COG1028. LUCA.
GeneTreeiENSGT00760000118868.
InParanoidiO16619.
KOiK11147.
OMAiMERAIFR.
OrthoDBiEOG091G0G3R.
PhylomeDBiO16619.

Enzyme and pathway databases

ReactomeiR-CEL-5365859. RA biosynthesis pathway.

Miscellaneous databases

PROiO16619.

Gene expression databases

BgeeiWBGene00000976.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO16619_CAEEL
AccessioniPrimary (citable) accession number: O16619
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 30, 2016
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.