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Protein
Submitted name:

Uncharacterized protein

Gene

C35A11.4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C35A11.4Imported, CELE_C35A11.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC35A11.4; CE35254; WBGene00016431.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 2620HelicalSequence analysisAdd
BLAST
Transmembranei62 – 8120HelicalSequence analysisAdd
BLAST
Transmembranei93 – 11422HelicalSequence analysisAdd
BLAST
Transmembranei120 – 14223HelicalSequence analysisAdd
BLAST
Transmembranei154 – 17724HelicalSequence analysisAdd
BLAST
Transmembranei183 – 20523HelicalSequence analysisAdd
BLAST
Transmembranei269 – 29123HelicalSequence analysisAdd
BLAST
Transmembranei311 – 32818HelicalSequence analysisAdd
BLAST
Transmembranei335 – 35824HelicalSequence analysisAdd
BLAST
Transmembranei364 – 39128HelicalSequence analysisAdd
BLAST
Transmembranei403 – 42422HelicalSequence analysisAdd
BLAST
Transmembranei436 – 45318HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

EPDiO16547.
PaxDbiO16547.
PRIDEiO16547.

Interactioni

Protein-protein interaction databases

STRINGi6239.C35A11.4.

Structurei

3D structure databases

ProteinModelPortaliO16547.
SMRiO16547. Positions 13-471.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini13 – 459447MFSInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili229 – 25325Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. [View classification]UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG0254. Eukaryota.
ENOG410XNQK. LUCA.
GeneTreeiENSGT00760000119022.
HOGENOMiHOG000018961.
InParanoidiO16547.
OMAiLCYFINA.
OrthoDBiEOG76QFH3.
PhylomeDBiO16547.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O16547-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEAPSFRMI CVAVITSIAG SFHFGFNLVL TNPSQEAFLN FMNQTLAKRF
60 70 80 90 100
DGGLSDNTLQ NIWSFVVAIL FLGALAGSFS IRLIADWIGR KNGLYISIAV
110 120 130 140 150
GVLAGGMSIA SKFIPLFELY IASRIVMGWS VSVSLGLSAL FLSEASPKQN
160 170 180 190 200
RGAIGMMTGT CVQLGTVCGS VIAMPQIFGT EDLWWLIYAT EIGIMLFFGA
210 220 230 240 250
ALPFFPESPG FLIQRGATEA ATKSIAYYYN CEIDEAEKHL NEIKEEQKNS
260 270 280 290 300
TKNFKMMDIV RKKSLRDKAF IGVVVTFAMS FSGVAVINAF AFDILKDTGL
310 320 330 340 350
KVLEASLAND AISVVSMISS IVAAVIVDRN GRRPLLLISF AGILVCNLII
360 370 380 390 400
FALMFTFYKF ENHVLGFILI CFICIFTFFF ALGPGPLCYF INAELVGQAA
410 420 430 440 450
RSAAQSWASV IQMLSRFVIV TAFLPMKNQL GEAWSYLILF VAPVAASLVY
460 470 480 490 500
LYFSLPETKN KNPFEVEEAI EDLPKFPLCG KNRVYDRKQS QEMVLSRQMQ
510
LVVDYGSIES LSYRL
Length:515
Mass (Da):56,827
Last modified:October 1, 2003 - v2
Checksum:i6CCB2E9C2523ACB2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD65616.1.
PIRiT31930.
RefSeqiNP_504430.2. NM_072029.3.
UniGeneiCel.4584.

Genome annotation databases

EnsemblMetazoaiC35A11.4; C35A11.4; WBGene00016431.
GeneIDi178921.
KEGGicel:CELE_C35A11.4.
UCSCiC35A11.4. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD65616.1.
PIRiT31930.
RefSeqiNP_504430.2. NM_072029.3.
UniGeneiCel.4584.

3D structure databases

ProteinModelPortaliO16547.
SMRiO16547. Positions 13-471.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C35A11.4.

Proteomic databases

EPDiO16547.
PaxDbiO16547.
PRIDEiO16547.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC35A11.4; C35A11.4; WBGene00016431.
GeneIDi178921.
KEGGicel:CELE_C35A11.4.
UCSCiC35A11.4. c. elegans.

Organism-specific databases

CTDi178921.
WormBaseiC35A11.4; CE35254; WBGene00016431.

Phylogenomic databases

eggNOGiKOG0254. Eukaryota.
ENOG410XNQK. LUCA.
GeneTreeiENSGT00760000119022.
HOGENOMiHOG000018961.
InParanoidiO16547.
OMAiLCYFINA.
OrthoDBiEOG76QFH3.
PhylomeDBiO16547.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO16547_CAEEL
AccessioniPrimary (citable) accession number: O16547
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: October 1, 2003
Last modified: July 6, 2016
This is version 122 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.