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Protein
Submitted name:

Fatty Acid CoA Synthetase family

Gene

acs-21

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-75876. Synthesis of very long-chain fatty acyl-CoAs.

Names & Taxonomyi

Protein namesi
Submitted name:
Fatty Acid CoA Synthetase familyImported
Gene namesi
Name:acs-21Imported
ORF Names:C50H11.1Imported, CELE_C50H11.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC50H11.1; CE08917; WBGene00016849; acs-21.

PTM / Processingi

Proteomic databases

EPDiO16481.
PaxDbiO16481.
PRIDEiO16481.

Interactioni

Protein-protein interaction databases

IntActiO16481. 1 interaction.
STRINGi6239.C50H11.1.

Structurei

3D structure databases

ProteinModelPortaliO16481.
SMRiO16481. Positions 45-516.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini37 – 415379AMP-bindingInterPro annotationAdd
BLAST
Domaini424 – 49976AMP-binding_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1176. Eukaryota.
COG0318. LUCA.
GeneTreeiENSGT00760000119304.
HOGENOMiHOG000229983.
InParanoidiO16481.
OMAiARQCATI.
OrthoDBiEOG7W9RVK.
PhylomeDBiO16481.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O16481-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTHHLKSSI HTTAGLRAAT SAANNIISQA NLQSDISKVL FIDDGRKITY
60 70 80 90 100
GDFVQRAGQY ATALTEKYKI KKGDRVMARV SKTTDTAALY AACLQIGALY
110 120 130 140 150
VPVNPALTQS EAAHYVKDAK PSLWITCKDD ADQIAMFQRV LKTVCIDNPV
160 170 180 190 200
EVINEKVLAD EAGKRKACTM IEHVEKSNAA TICFTSGTTG APKGAVLSHG
210 220 230 240 250
ALTNNTNALV QEWGFTENDV NLHCLPIFHA HGLYFSLHCS LFSHSSVIWR
260 270 280 290 300
PNFDAEDCSK HLKNATVFMG VPTFYSRLLA TNNFNKESFE KIRLFISGSA
310 320 330 340 350
PLSVPTLEEF EKRTGQVILE RYGMTEAGVI ASNPLKGKRK AGTVGQALKG
360 370 380 390 400
VQCRVTENGE IEIKSDSIFS EYWKNPEKTK EEFTEDGWFK TGDVGSLDKD
410 420 430 440 450
GYLTIGGRSK DMIISGGENI YPKEIEDAID SIEFVKESAV IAAPHPDFGE
460 470 480 490 500
AVVAVVVPKN MVEDEQKFEE DLIEMLRKKL AKYKVPKKVI LLEELPRNHI
510
TKVRKDILRA SYNKLFS
Length:517
Mass (Da):57,249
Last modified:January 1, 1998 - v1
Checksum:iCD2BC274C9779C07
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD67799.1.
PIRiD88987.
RefSeqiNP_503845.1. NM_071444.1.
UniGeneiCel.4424.

Genome annotation databases

EnsemblMetazoaiC50H11.1; C50H11.1; WBGene00016849.
GeneIDi178751.
KEGGicel:CELE_C50H11.1.
UCSCiC50H11.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD67799.1.
PIRiD88987.
RefSeqiNP_503845.1. NM_071444.1.
UniGeneiCel.4424.

3D structure databases

ProteinModelPortaliO16481.
SMRiO16481. Positions 45-516.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiO16481. 1 interaction.
STRINGi6239.C50H11.1.

Proteomic databases

EPDiO16481.
PaxDbiO16481.
PRIDEiO16481.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC50H11.1; C50H11.1; WBGene00016849.
GeneIDi178751.
KEGGicel:CELE_C50H11.1.
UCSCiC50H11.1. c. elegans.

Organism-specific databases

CTDi178751.
WormBaseiC50H11.1; CE08917; WBGene00016849; acs-21.

Phylogenomic databases

eggNOGiKOG1176. Eukaryota.
COG0318. LUCA.
GeneTreeiENSGT00760000119304.
HOGENOMiHOG000229983.
InParanoidiO16481.
OMAiARQCATI.
OrthoDBiEOG7W9RVK.
PhylomeDBiO16481.

Enzyme and pathway databases

ReactomeiR-CEL-75876. Synthesis of very long-chain fatty acyl-CoAs.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO16481_CAEEL
AccessioniPrimary (citable) accession number: O16481
Entry historyi
Integrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: July 6, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.