O15320 (CTGE5_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 109.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Cutaneous T-cell lymphoma-associated antigen 5 Short name=Protein cTAGE-5 Alternative name(s): Meningioma-expressed antigen 6/11 cTAGE family member 5 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 804 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Tumor-associated antigen. |
| Tissue specificity | Isoform 5A is expressed only in testis (at the protein level). Other isoforms are expressed in several other normal tissues, including brain, muscle and cranial skin. Isoform 5A (at protein level) and isoform 5B are expressed in cutaneous T-cell lymphoma (CTCL) cell lines, colorectal carcinomas, breast carcinomas and melanoma. Isoform 5B, but not isoform 5A, is expressed in head and neck squamous cell carcinoma. |
| Involvement in disease | Autoantibodies against CTAGE5 are present in several cancer types, including benign meningioma and cutaneous T-cell lymphoma (CTCL). |
| Sequence similarities | Belongs to the cTAGE family. |
| Sequence caution | The sequence AAB86589.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Molecular_function | enzyme activator activity Traceable author statement Ref.1. Source: ProtInc |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| ABL1 | P00519 | 1 | EBI-1050253,EBI-375543 |
Alternative products
| This entry describes 8 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform MEA6 (identifier: O15320-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform MEA11 (identifier: O15320-2) The sequence of this isoform differs from the canonical sequence as follows: 514-556: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 5A (identifier: O15320-3) The sequence of this isoform differs from the canonical sequence as follows: 1-29: Missing. | ||||||
| Isoform 5B (identifier: O15320-4) The sequence of this isoform differs from the canonical sequence as follows: 750-771: MRNVYPPRGFPPYLPPRPGFFP → SARSPPGAGAPASGRGLGGPQK 772-804: Missing. | ||||||
| Isoform 6 (identifier: O15320-5) The sequence of this isoform differs from the canonical sequence as follows: 128-128: E → EVENQM | ||||||
| Isoform 7 (identifier: O15320-6) The sequence of this isoform differs from the canonical sequence as follows: 1-80: Missing. 128-128: E → EVENQM | ||||||
| Isoform 8 (identifier: O15320-7) The sequence of this isoform differs from the canonical sequence as follows: 1-29: Missing. 515-557: Missing. | ||||||
| Isoform 9 (identifier: O15320-8) The sequence of this isoform differs from the canonical sequence as follows: 1-80: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 804 | 804 | Cutaneous T-cell lymphoma-associated antigen 5 | PRO_0000189541 | |||||
Regions | |||||||||
| Coiled coil | 87 – 273 | 187 | Potential | ||||||
| Coiled coil | 321 – 501 | 181 | Potential | ||||||
| Compositional bias | 502 – 804 | 303 | Pro-rich | ||||||
| Compositional bias | 553 – 558 | 6 | Poly-Gly | ||||||
Amino acid modifications | |||||||||
| Modified residue | 536 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 548 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 647 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 678 | 1 | Phosphoserine By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 80 | 80 | Missing in isoform 7 and isoform 9. | VSP_035961 | |||||
| Alternative sequence | 1 – 29 | 29 | Missing in isoform 5A and isoform 8. | VSP_012545 | |||||
| Alternative sequence | 128 | 1 | E → EVENQM in isoform 6 and isoform 7. | VSP_035962 | |||||
| Alternative sequence | 514 – 556 | 43 | Missing in isoform MEA11. | VSP_004322 | |||||
| Alternative sequence | 515 – 557 | 43 | Missing in isoform 8. | VSP_035963 | |||||
| Alternative sequence | 750 – 771 | 22 | MRNVY…PGFFP → SARSPPGAGAPASGRGLGGP QK in isoform 5B. | VSP_012546 | |||||
| Alternative sequence | 772 – 804 | 33 | Missing in isoform 5B. | VSP_012547 | |||||
| Natural variant | 6 | 1 | V → A. Ref.1 Ref.2 Corresponds to variant rs7140561 [ dbSNP | Ensembl ]. | VAR_047889 | |||||
| Natural variant | 11 | 1 | Y → D. Ref.7 Corresponds to variant rs17855895 [ dbSNP | Ensembl ]. | VAR_047890 | |||||
| Natural variant | 205 | 1 | K → N. Ref.7 Corresponds to variant rs17855896 [ dbSNP | Ensembl ]. | VAR_047891 | |||||
| Natural variant | 250 | 1 | K → E. Corresponds to variant rs10162564 [ dbSNP | Ensembl ]. | VAR_047892 | |||||
| Natural variant | 360 | 1 | E → Q. Ref.1 Ref.2 Ref.4 Corresponds to variant rs1950952 [ dbSNP | Ensembl ]. | VAR_047893 | |||||
| Natural variant | 375 | 1 | N → S. Corresponds to variant rs17109109 [ dbSNP | Ensembl ]. | VAR_047894 | |||||
| Natural variant | 699 | 1 | I → V. Ref.1 Ref.3 Ref.7 Corresponds to variant rs1140952 [ dbSNP | Ensembl ]. | VAR_047895 | |||||
| Natural variant | 738 | 1 | G → R. Ref.1 Ref.2 Ref.4 Corresponds to variant rs1060878 [ dbSNP | Ensembl ]. | VAR_047896 | |||||
Experimental info | |||||||||
| Sequence conflict | 90 | 1 | S → N in CAE45997. Ref.4 | ||||||
| Sequence conflict | 145 | 1 | I → M in CAE45997. Ref.4 | ||||||
| Sequence conflict | 195 | 1 | K → Q in AAB86593. Ref.1 | ||||||
| Sequence conflict | 195 | 1 | K → Q in AAB86589. Ref.1 | ||||||
| Sequence conflict | 198 | 1 | Q → P in AAB86593. Ref.1 | ||||||
| Sequence conflict | 546 | 1 | R → T in AAB86593. Ref.1 | ||||||
| Sequence conflict | 589 | 1 | P → L in AAB86593. Ref.1 | ||||||
| Sequence conflict | 594 | 1 | S → F in AAB86593. Ref.1 | ||||||
| Sequence conflict | 604 | 1 | R → M in AAN77610. Ref.2 | ||||||
| Sequence conflict | 776 | 1 | S → F in AAN77610. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "cDNA cloning and chromosomal mapping of a predicted coiled-coil proline-rich protein immunogenic in meningioma patients." Heckel D., Brass N., Fischer U., Blin N., Steudel I., Tuereci O., Fackler O., Zang K.D., Meese E. Hum. Mol. Genet. 6:2031-2041(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS MEA6 AND MEA11), VARIANTS ALA-6; GLN-360; VAL-699 AND ARG-738. Tissue: Meningioma. |
| [2] | "cTAGE: a cutaneous T cell lymphoma associated antigen family with tumor-specific splicing." Usener D., Schadendorf D., Koch J., Duebel S., Eichmueller S. J. Invest. Dermatol. 121:198-206(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 5A AND 5B), VARIANTS ALA-6; GLN-360 AND ARG-738. Tissue: Testis. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 8), VARIANT VAL-699. Tissue: Tongue. |
| [4] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 9), VARIANTS GLN-360 AND ARG-738. Tissue: Salivary gland. |
| [5] | "The DNA sequence and analysis of human chromosome 14." Heilig R., Eckenberg R., Petit J.-L., Fonknechten N., Da Silva C., Cattolico L., Levy M., Barbe V., De Berardinis V., Ureta-Vidal A., Pelletier E., Vico V., Anthouard V., Rowen L., Madan A., Qin S., Sun H., Du H. Weissenbach J.Nature 421:601-607(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 6 AND 7), VARIANTS ASP-11; ASN-205 AND VAL-699. Tissue: B-cell and Skin. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | U73682 mRNA. Translation: AAB86589.1. Different initiation. U94780 mRNA. Translation: AAB86593.1. AF338233 mRNA. Translation: AAN77610.1. AF338234 mRNA. Translation: AAN77611.1. AK091252 mRNA. Translation: BAG52318.1. BX640994 mRNA. Translation: CAE45997.1. AL132639 Genomic DNA. No translation available. CH471078 Genomic DNA. Translation: EAW65808.1. CH471078 Genomic DNA. Translation: EAW65812.1. CH471078 Genomic DNA. Translation: EAW65813.1. BC051363 mRNA. Translation: AAH51363.2. BC064355 mRNA. Translation: AAH64355.1. |
| IPI | IPI00006122. IPI00218139. IPI00401163. IPI00515009. IPI00872345. IPI00915283. IPI00915291. IPI00915443. |
| RefSeq | NP_001234917.1. NM_001247988.1. NP_001234918.1. NM_001247989.1. NP_001234919.1. NM_001247990.1. NP_005921.2. NM_005930.3. NP_976231.1. NM_203356.2. |
| UniGene | Hs.509200. Hs.540038. Hs.741763. |
3D structure databases | |
| ProteinModelPortal | O15320. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | O15320. 4 interactions. |
| MINT | MINT-4526262. |
PTM databases | |
| PhosphoSite | O15320. |
Proteomic databases | |
| PaxDb | O15320. |
| PRIDE | O15320. |
Protocols and materials databases | |
| DNASU | 4253. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000280083; ENSP00000280083; ENSG00000150527. ENST00000341502; ENSP00000339286; ENSG00000150527. ENST00000348007; ENSP00000343912; ENSG00000150527. ENST00000396158; ENSP00000379462; ENSG00000150527. ENST00000396165; ENSP00000379468; ENSG00000150527. ENST00000553352; ENSP00000450449; ENSG00000150527. ENST00000556148; ENSP00000452562; ENSG00000150527. ENST00000557038; ENSP00000450869; ENSG00000150527. |
| GeneID | 4253. |
| KEGG | hsa:4253. |
| UCSC | uc001wuy.4. human. uc001wvb.4. human. uc001wvf.4. human. uc001wvh.4. human. uc001wvi.4. human. |
Organism-specific databases | |
| CTD | 4253. |
| GeneCards | GC14P039734. |
| H-InvDB | HIX0021193. |
| HGNC | HGNC:7057. CTAGE5. |
| HPA | HPA000387. HPA000922. |
| MIM | 602132. gene. |
| neXtProt | NX_O15320. |
| PharmGKB | PA30788. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG133684. |
| HOVERGEN | HBG051216. |
| InParanoid | O15320. |
| PhylomeDB | O15320. |
Gene expression databases | |
| ArrayExpress | O15320. |
| Bgee | O15320. |
| CleanEx | HS_CTAGE5. |
| Genevestigator | O15320. |
| GermOnline | ENSG00000150527. Homo sapiens. |
Family and domain databases | |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 4253. |
| NextBio | 16763. |
| SOURCE | Search... |
Entry information
| Entry name | CTGE5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O15320 Secondary accession number(s): B3KRA6 Q8IX93 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 14 Human chromosome 14: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
