Reviewed,
UniProtKB/Swiss-Prot O15111 (IKKA_HUMAN)
Last modified
February 9, 2010.
Version 114.
History...
Clusters with 100%,
90%,
50% identity |
Documents (7) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Inhibitor of nuclear factor kappa-B kinase subunit alpha Short name=I-kappa-B kinase alpha Short name=IkBKA Short name=IKK-alpha Short name=IKK-A Short name=IkappaB kinase EC=2.7.11.10 Alternative name(s): I-kappa-B kinase 1 Short name=IKK1 Conserved helix-loop-helix ubiquitous kinase Nuclear factor NF-kappa-B inhibitor kinase alpha Short name=NFKBIKA Transcription factor 16 Short name=TCF-16 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 745 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Acts as part of the IKK complex in the conventional pathway of NF-kappa-B activation and phosphorylates inhibitors of NF-kappa-B thus leading to the dissociation of the inhibitor/NF-kappa-B complex and ultimately the degradation of the inhibitor. As part of the non-canonical pathway of NF-kappa-B activation, the MAP3K14-activated CHUK/IKKA homodimer phosphorylates NFKB2/p100 associated with RelB, inducing its proteolytic processing to NFKB2/p52 and the formation of NF-kappa-B RelB-p52 complexes. Also phosphorylates NCOA3. Phosphorylates 'Ser-10' of histone H3 at NF-kappa-B-regulated promoters during inflammatory responses triggered by cytokines. Ref.16 |
| Catalytic activity | ATP + [I-kappa-B protein] = ADP + [I-kappa-B phosphoprotein]. |
| Enzyme regulation | Activated when phosphorylated and inactivated when dephosphorylated. |
| Subunit structure | Component of the I-kappa-B-kinase (IKK) core complex consisting of CHUK, IKBKB and IKBKG; probably four alpha/CHUK-beta/IKBKB dimers are associated with four gamma/IKBKG subunits. The IKK core complex seems to associate with regulatory or adapter proteins to form a IKK-signalosome holo-complex. Part of a complex composed of NCOA2, NCOA3, CHUK/IKKA, IKBKB, IKBKG and CREBBP. Part of a 70-90 kDa complex at least consisting of CHUK/IKKA, IKBKB, NFKBIA, RELA, IKBKAP and MAP3K14. Directly interacts with IKK-gamma/NEMO and TRPC4AP By similarity. May interact with TRAF2. Interacts with NALP2. May interact with MAVS/IPS1. Interacts with ARRB1 and ARRB2. Ref.14 Ref.17 Ref.18 Ref.19 |
| Subcellular location | Cytoplasm. Nucleus. Note: Shuttles between the cytoplasm and the nucleus. Ref.16 |
| Tissue specificity | Widely expressed. |
| Post-translational modification | Phosphorylated by MAP3K14/NIK, AKT and to a lesser extent by MEKK1, and dephosphorylated by PP2A. Autophosphorylated. Ref.16 Ref.9 Ref.10 Ref.12 |
| Sequence similarities | Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. I-kappa-B kinase subfamily. Contains 1 protein kinase domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Nucleus |
| Coding sequence diversity | Polymorphism |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Kinase Serine/threonine-protein kinase Transferase |
| PTM | Phosphoprotein |
| Technical term | 3D-structure Complete proteome Direct protein sequencing |
| Gene Ontology (GO) | |
| Biological process | I-kappaB phosphorylation Ref.2 Traceable author statement. Source: ProtInc immune response Ref.3Traceable author statement. Source: ProtInc |
| Cellular component | cytosol Ref.10 Inferred from Experiment. Source: Reactome nucleusInferred from direct assay. Source: HPA |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW IkappaB kinase activity Ref.2Traceable author statement. Source: ProtInc identical protein binding Ref.9Inferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| itself | 1 | EBI-81249,EBI-81249 | ||
| FKBP5 | Q13451 | 1 | EBI-81249,EBI-306914 | |
| IKBKB | O14920 | 3 | EBI-81249,EBI-81266 | |
| IKBKG | Q9Y6K9 | 3 | EBI-81249,EBI-81279 | |
| MAP3K14 | Q99558 | 2 | EBI-81249,EBI-358011 | |
| MAVS | Q7Z434 | 1 | EBI-81249,EBI-995373 | |
| NCOA3 | Q9Y6Q9 | 1 | EBI-81249,EBI-81196 | |
| NFKBIA | P25963 | 3 | EBI-81249,EBI-307386 | |
| RELA | Q04206 | 1 | EBI-81249,EBI-73886 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 745 | 745 | Inhibitor of nuclear factor kappa-B kinase subunit alpha | PRO_0000086011 | |||||
Regions | |||||||||
| Domain | 15 – 302 | 288 | Protein kinase | ||||||
| Domain | 455 – 476 | 22 | Leucine-zipper | ||||||
| Nucleotide binding | 21 – 29 | 9 | ATP By similarity | ||||||
| Region | 738 – 743 | 6 | NEMO-binding | ||||||
Sites | |||||||||
| Active site | 144 | 1 | Proton acceptor By similarity | ||||||
| Binding site | 44 | 1 | ATP By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 23 | 1 | Phosphothreonine; by PKB/AKT1 Ref.10 | ||||||
| Modified residue | 176 | 1 | Phosphoserine; by MAP3K14 Ref.9 | ||||||
Natural variations | |||||||||
| Natural variant | 126 | 1 | S → C: dbSNP rs34427437. Ref.21 | VAR_040565 | |||||
| Natural variant | 155 | 1 | V → A: dbSNP rs2230803. Ref.21 | VAR_040566 | |||||
| Natural variant | 268 | 1 | I → V: dbSNP rs2230804. Ref.21 Ref.3 Ref.5 Ref.6 | VAR_021359 | |||||
Experimental info | |||||||||
| Mutagenesis | 23 | 1 | T → A: Loss of phosphorylation and decrease of kinase activity. Ref.10 | ||||||
| Mutagenesis | 44 | 1 | K → A: Loss of kinase activity. Ref.3 Ref.1 | ||||||
| Mutagenesis | 44 | 1 | K → M: Loss of autophosphorylation. Ref.3 Ref.1 | ||||||
| Mutagenesis | 176 | 1 | S → A: Loss of phosphorylation and of activity. Ref.9 Ref.3 | ||||||
| Mutagenesis | 176 | 1 | S → E: Full activation. Ref.9 Ref.3 | ||||||
| Mutagenesis | 179 | 1 | T → A: No change in phosphorylation. Ref.9 | ||||||
| Mutagenesis | 180 | 1 | S → A: No change in phosphorylation. Ref.9 | ||||||
| Sequence conflict | 543 | 1 | E → G in AAC51671. Ref.2 | ||||||
| Sequence conflict | 604 | 1 | L → R in AAC50713. Ref.7 | ||||||
| Sequence conflict | 679 – 680 | 2 | TS → AY in AAC50713. Ref.7 | ||||||
| Sequence conflict | 684 | 1 | P → A Ref.3 | ||||||
| Sequence conflict | 684 | 1 | P → A in AAC50713. Ref.7 | ||||||
| Sequence conflict | 686 – 687 | 2 | TS → DL in AAC50713. Ref.7 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Identification and characterization of an IkappaB kinase." Regnier C.H., Song H.Y., Gao X., Goeddel D.V., Cao Z., Rothe M. Cell 90:373-383(1997) [PubMed: 9244310] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], MUTAGENESIS OF LYS-44. Tissue: T-cell. |
| [2] | "A cytokine-responsive IkappaB kinase that activates the transcription factor NF-kappaB." DiDonato J.A., Hayakawa M., Rothwarf D.M., Zandi E., Karin M. Nature 388:548-554(1997) [PubMed: 9252186] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], PARTIAL PROTEIN SEQUENCE. |
| [3] | "IKK-1 and IKK-2: cytokine-activated IkappaB kinases essential for NF-kappaB activation." Mercurio F., Zhu H., Murray B.W., Shevchenko A., Bennett B.L., Li J.W., Young D.B., Barbosa M., Mann M., Manning A., Rao A. Science 278:860-866(1997) [PubMed: 9346484] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], PARTIAL PROTEIN SEQUENCE, VARIANT VAL-268, MUTAGENESIS OF LYS-44 AND SER-176. Tissue: Cervix carcinoma. |
| [4] | "IkappaB kinase-alpha and -beta genes are coexpressed in adult and embryonic tissues but localized to different human chromosomes." Hu M.C.-T., Wang Y.-P. Gene 222:31-40(1998) [PubMed: 9813230] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Heart. |
| [5] | SeattleSNPs variation discovery resource Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANT VAL-268. |
| [6] | "The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. Rogers J.Nature 429:375-381(2004) [PubMed: 15164054] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT VAL-268. |
| [7] | "CHUK, a new member of the helix-loop-helix and leucine zipper families of interacting proteins, contains a serine-threonine kinase catalytic domain." Connelly M.A., Marcu K.B. Cell. Mol. Biol. Res. 41:537-549(1995) [PubMed: 8777433] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 32-745. Tissue: Cervix carcinoma. |
| [8] | "IKAP is a scaffold protein of the IkappaB kinase complex." Cohen L., Henzel W.J., Baeuerle P.A. Nature 395:292-296(1998) [PubMed: 9751059] [Abstract] Cited for: IDENTIFICATION IN A COMPLEX WITH IKBKB; NFKBIA; RELA; IKBKAP AND MAP3K14. |
| [9] | "NF-kappaB-inducing kinase activates IKK-alpha by phosphorylation of Ser-176." Ling L., Cao Z., Goeddel D.V. Proc. Natl. Acad. Sci. U.S.A. 95:3792-3797(1998) [PubMed: 9520446] [Abstract] Cited for: PHOSPHORYLATION AT SER-176, MUTAGENESIS OF SER-176; THR-179 AND SER-180. |
| [10] | "NF-kappaB activation by tumour necrosis factor requires the Akt serine-threonine kinase." Ozes O.N., Mayo L.D., Gustin J.A., Pfeffer S.R., Pfeffer L.M., Donner D.B. Nature 401:82-85(1999) [PubMed: 10485710] [Abstract] Cited for: PHOSPHORYLATION AT THR-23, MUTAGENESIS OF THR-23. |
| [11] | "Positive and negative regulation of IkappaB kinase activity through IKKbeta subunit phosphorylation." Delhase M., Hayakawa M., Chen Y., Karin M. Science 284:309-313(1999) [PubMed: 10195894] [Abstract] Cited for: IKKA-IKKB BINDING. |
| [12] | "Coordinate regulation of IkappaB kinases by mitogen-activated protein kinase kinase kinase 1 and NF-kappaB-inducing kinase." Nemoto S., DiDonato J.A., Lin A. Mol. Cell. Biol. 18:7336-7343(1998) [PubMed: 9819420] [Abstract] Cited for: IKK PHOSPHORYLATION. |
| [13] | "The I kappa B/NF-kappa B system: a key determinant of mucosal inflammation and protection." Jobin C., Sartor R.B. Am. J. Physiol. 278:C451-C462(2000) [PubMed: 10712233] [Abstract] Cited for: REVIEW. |
| [14] | "Regulation of SRC-3 (pCIP/ACTR/AIB-1/RAC-3/TRAM-1) coactivator activity by I kappa B kinase." Wu R.-C., Qin J., Hashimoto Y., Wong J., Xu J., Tsai S.Y., Tsai M.-J., O'Malley B.W. Mol. Cell. Biol. 22:3549-3561(2002) [PubMed: 11971985] [Abstract] Cited for: SUBUNIT OF A COMPLEX CONTAINING CREBBP; NCOA2; NCOA3; IKKB AND IKBKG. |
| [15] | "Tetrameric oligomerization of IkappaB kinase gamma (IKKgamma) is obligatory for IKK complex activity and NF-kappaB activation." Tegethoff S., Behlke J., Scheidereit C. Mol. Cell. Biol. 23:2029-2041(2003) [PubMed: 12612076] [Abstract] Cited for: COMPOSITION OF THE IKK COMPLEX. |
| [16] | "Histone H3 phosphorylation by IKK-alpha is critical for cytokine-induced gene expression." Yamamoto Y., Verma U.N., Prajapati S., Kwak Y.T., Gaynor R.B. Nature 423:655-659(2003) [PubMed: 12789342] [Abstract] Cited for: SUBCELLULAR LOCATION, FUNCTION IN PHOSPHORYLATION OF HISTONE H3. |
| [17] | "PAN1/NALP2/PYPAF2, an inducible inflammatory mediator that regulates NF-kappaB and caspase-1 activation in macrophages." Bruey J.-M., Bruey-Sedano N., Newman R., Chandler S., Stehlik C., Reed J.C. J. Biol. Chem. 279:51897-51907(2004) [PubMed: 15456791] [Abstract] Cited for: INTERACTION WITH NALP2. |
| [18] | "beta-Arrestin inhibits NF-kappaB activity by means of its interaction with the NF-kappaB inhibitor IkappaBalpha." Witherow D.S., Garrison T.R., Miller W.E., Lefkowitz R.J. Proc. Natl. Acad. Sci. U.S.A. 101:8603-8607(2004) [PubMed: 15173580] [Abstract] Cited for: INTERACTION WITH ARRB1 AND ARRB2. |
| [19] | "Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus." Meylan E., Curran J., Hofmann K., Moradpour D., Binder M., Bartenschlager R., Tschopp J. Nature 437:1167-1172(2005) [PubMed: 16177806] [Abstract] Cited for: INTERACTION WITH MAVS. |
| [20] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
| [21] | "Patterns of somatic mutation in human cancer genomes." Greenman C., Stephens P., Smith R., Dalgliesh G.L., Hunter C., Bignell G., Davies H., Teague J., Butler A., Stevens C., Edkins S., O'Meara S., Vastrik I., Schmidt E.E., Avis T., Barthorpe S., Bhamra G., Buck G. Stratton M.R.Nature 446:153-158(2007) [PubMed: 17344846] [Abstract] Cited for: VARIANTS [LARGE SCALE ANALYSIS] CYS-126; ALA-155 AND VAL-268. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF012890 mRNA. Translation: AAC51662.1. AF009225 mRNA. Translation: AAC51671.1. AF080157 mRNA. Translation: AAD08996.1. AY652653 Genomic DNA. Translation: AAT49098.1. AL138921 Genomic DNA. Translation: CAH72401.1. U22512 mRNA. Translation: AAC50713.1. | ||||||||||||
| IPI | IPI00005104. | ||||||||||||
| RefSeq | NP_001269.3. | ||||||||||||
| UniGene | Hs.198998 | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| SMR | O15111. Positions 20-289, 709-744. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| DIP | DIP-27526N. | ||||||||||||
| IntAct | O15111. 41 interactions. | ||||||||||||
| STRING | O15111. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | O15111. | ||||||||||||
Proteomic databases | |||||||||||||
| PRIDE | O15111. | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000370397; ENSP00000359424; ENSG00000213341; Homo sapiens. [Genome view] | ||||||||||||
| GeneID | 1147. | ||||||||||||
| KEGG | hsa:1147. | ||||||||||||
| UCSC | uc001kqp.1. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 1147. | ||||||||||||
| GeneCards | GC10M101938. | ||||||||||||
| H-InvDB | HIX0009119. | ||||||||||||
| HGNC | HGNC:1974. CHUK. | ||||||||||||
| HPA | CAB004240. CAB018564. HPA001402. | ||||||||||||
| MIM | 600664. gene. | ||||||||||||
| PharmGKB | PA26510. | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | prNOG14699. | ||||||||||||
| HOGENOM | HBG358635. | ||||||||||||
| HOVERGEN | O15111. | ||||||||||||
| InParanoid | O15111. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| BRENDA | 2.7.11.10. 247. | ||||||||||||
| Pathway_Interaction_DB | nfkappabalternativepathway. Alternative NF-kappaB pathway. bcr_5pathway. BCR signaling pathway. nfkappabcanonicalpathway. Canonical NF-kappaB pathway. pi3kciaktpathway. Class I PI3K signaling events mediated by Akt. faspathway. FAS signaling pathway (CD95). fcer1pathway. Fc-epsilon receptor I signaling in mast cells. foxopathway. FoxO family signaling. hivnefpathway. HIV-1 Nef: Negative effector of Fas and TNF-alpha. il1pathway. IL1-mediated signaling events. avb3_opn_pathway. Osteopontin-mediated events. p75ntrpathway. p75(NTR)-mediated signaling. tcrpathway. TCR signaling in naive CD4+ T cells. cd8tcrpathway. TCR signaling in naive CD8+ T cells. tnfpathway. TNF receptor signaling pathway. trail_pathway. TRAIL signaling pathway. | ||||||||||||
| Reactome | REACT_11061. Signalling by NGF. REACT_6900. Signaling in Immune system. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | O15111. | ||||||||||||
| Bgee | O15111. | ||||||||||||
| CleanEx | HS_CHUK. | ||||||||||||
| Genevestigator | O15111. | ||||||||||||
| GermOnline | ENSG00000107566. Homo sapiens. | ||||||||||||
Family and domain databases | |||||||||||||
| InterPro | IPR011009. Kinase-like_dom. IPR000719. Prot_kinase_cat_dom. IPR017441. Protein_kinase_ATP_BS. IPR017442. Se/Thr_prot_kinase-like_dom. IPR008271. Ser/Thr_prot_kinase_AS. IPR002290. Ser/Thr_prot_kinase_dom. [Graphical view] | ||||||||||||
| Pfam | PF00069. Pkinase. 1 hit. [Graphical view] | ||||||||||||
| SMART | SM00220. S_TKc. 1 hit. [Graphical view] | ||||||||||||
| PROSITE | PS00107. PROTEIN_KINASE_ATP. 1 hit. PS50011. PROTEIN_KINASE_DOM. 1 hit. PS00108. PROTEIN_KINASE_ST. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other Resources | |||||||||||||
| NextBio | 4772. | ||||||||||||
| SOURCE | Search... | ||||||||||||
Entry information
| Entry name | IKKA_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O15111 Secondary accession number(s): O14666 Q92467 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| Human and mouse protein kinases Human and mouse protein kinases: classification and index |
| SIMILARITY comments Index of protein domains and families |

Clusters with


