O15033 (K0317_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 90.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Protein KIAA0317 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 823 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Subcellular location | Membrane; Single-pass membrane protein Potential. |
| Sequence similarities | Contains 1 filamin repeat. Contains 1 HECT (E6AP-type E3 ubiquitin-protein ligase) domain. |
| Sequence caution | The sequence BAA20775.2 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ubl conjugation pathway |
| Cellular component | Membrane |
| Coding sequence diversity | Alternative splicing |
| Domain | Transmembrane Transmembrane helix |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | protein ubiquitination involved in ubiquitin-dependent protein catabolic process Inferred from Biological aspect of Ancestor. Source: RefGenome |
| Cellular_component | cytoplasm Inferred from Biological aspect of Ancestor. Source: RefGenome integral to membraneInferred from electronic annotation. Source: UniProtKB-KW nucleusInferred from Biological aspect of Ancestor. Source: RefGenome |
| Molecular_function | ubiquitin-protein ligase activity Inferred from Biological aspect of Ancestor. Source: RefGenome |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: O15033-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O15033-2) The sequence of this isoform differs from the canonical sequence as follows: 790-823: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 823 | 823 | Protein KIAA0317 | PRO_0000120349 | |||||
Regions | |||||||||
| Transmembrane | 2 – 22 | 21 | Helical; Potential | ||||||
| Repeat | 52 – 158 | 107 | Filamin | ||||||
| Domain | 483 – 823 | 341 | HECT | ||||||
Natural variations | |||||||||
| Alternative sequence | 790 – 823 | 34 | Missing in isoform 2. | VSP_013259 | |||||
Experimental info | |||||||||
| Sequence conflict | 114 | 1 | T → N in AAH32944. Ref.5 | ||||||
| Sequence conflict | 373 | 1 | P → H in AAH32944. Ref.5 | ||||||
Sequences
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References
| [1] | "Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro." Nagase T., Ishikawa K., Nakajima D., Ohira M., Seki N., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 4:141-150(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Trachea. |
| [3] | "The DNA sequence and analysis of human chromosome 14." Heilig R., Eckenberg R., Petit J.-L., Fonknechten N., Da Silva C., Cattolico L., Levy M., Barbe V., De Berardinis V., Ureta-Vidal A., Pelletier E., Vico V., Anthouard V., Rowen L., Madan A., Qin S., Sun H., Du H. Weissenbach J.Nature 421:601-607(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Testis. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB002315 mRNA. Translation: BAA20775.2. Different initiation. AK304217 mRNA. Translation: BAG65089.1. AC007956 Genomic DNA. Translation: AAF61276.1. CH471061 Genomic DNA. Translation: EAW81186.1. BC032944 mRNA. Translation: AAH32944.1. |
| IPI | IPI00006561. IPI00472646. |
| RefSeq | NP_001034568.1. NM_001039479.1. |
| UniGene | Hs.497417. |
3D structure databases | |
| ProteinModelPortal | O15033. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | O15033. 3 interactions. |
| MINT | MINT-4657782. |
PTM databases | |
| PhosphoSite | O15033. |
Proteomic databases | |
| PaxDb | O15033. |
| PRIDE | O15033. |
Protocols and materials databases | |
| DNASU | 9870. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000356357; ENSP00000348714; ENSG00000119682. |
| GeneID | 9870. |
| KEGG | hsa:9870. |
| UCSC | uc001xqb.3. human. |
Organism-specific databases | |
| CTD | 9870. |
| GeneCards | GC14M075127. |
| HGNC | HGNC:20363. KIAA0317. |
| HPA | HPA051306. |
| neXtProt | NX_O15033. |
| PharmGKB | PA134985474. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG5021. |
| HOGENOM | HOG000008177. |
| HOVERGEN | HBG052181. |
| InParanoid | O15033. |
| OMA | FTFRVCP. |
| OrthoDB | EOG4VMFDQ. |
| PhylomeDB | O15033. |
Gene expression databases | |
| ArrayExpress | O15033. |
| Bgee | O15033. |
| CleanEx | HS_KIAA0317. |
| Genevestigator | O15033. |
| GermOnline | ENSG00000119682. Homo sapiens. |
Family and domain databases | |
| Gene3D | 2.60.40.10. 1 hit. |
| InterPro | IPR001298. Filamin. IPR017868. Filamin/ABP280_repeat-like. IPR000569. HECT. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view] |
| Pfam | PF00630. Filamin. 1 hit. PF00632. HECT. 1 hit. [Graphical view] |
| SMART | SM00119. HECTc. 1 hit. SM00557. IG_FLMN. 1 hit. [Graphical view] |
| SUPFAM | SSF56204. HECT. 1 hit. SSF81296. Ig_E-set. 1 hit. |
| PROSITE | PS50194. FILAMIN_REPEAT. 1 hit. PS50237. HECT. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 9870. |
| NextBio | 37207. |
Entry information
| Entry name | K0317_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O15033 Secondary accession number(s): B4E2C7, Q7LDY1, Q8IYY9 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 14 Human chromosome 14: entries, gene names and cross-references to MIM |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
