O14924 (RGS12_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 117.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Regulator of G-protein signaling 12 Short name=RGS12 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1447 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. |
| Subunit structure | Interacts with GNAI1, GNAI2 and GNAI3; the interactions are GDP-dependent By similarity. |
| Subcellular location | |
| Tissue specificity | Isoform 3 is brain specific. |
| Domain | The GoLoco domain is necessary for interaction with GNAI1, GNAI2 and GNAI3 By similarity. |
| Sequence similarities | Contains 1 GoLoco domain. Contains 1 PDZ (DHR) domain. Contains 1 PID domain. Contains 2 RBD (Ras-binding) domains. Contains 1 RGS domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Repeat |
| Molecular function | Signal transduction inhibitor |
| PTM | Isopeptide bond Ubl conjugation |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | regulation of G-protein coupled receptor protein signaling pathway Traceable author statement Ref.2. Source: ProtInc termination of G-protein coupled receptor signaling pathwayInferred from electronic annotation. Source: InterPro |
| Cellular_component | condensed nuclear chromosome Traceable author statement Ref.1. Source: ProtInc cytoplasmInferred from Biological aspect of Ancestor. Source: RefGenome plasma membraneInferred from Biological aspect of Ancestor. Source: RefGenome |
| Molecular_function | GTPase activator activity Inferred from Biological aspect of Ancestor. Source: RefGenome receptor signaling protein activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: O14924-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O14924-2) The sequence of this isoform differs from the canonical sequence as follows: 1-658: Missing. 659-666: TRSLDDLE → MSLSLFFQ | ||||||
| Isoform 3 (identifier: O14924-3) The sequence of this isoform differs from the canonical sequence as follows: 1-647: Missing. 648-666: RSFGRSKRFSITRSLDDLE → MNLGKELSNETHVSNDQQ | ||||||
| Isoform 4 (identifier: O14924-4) The sequence of this isoform differs from the canonical sequence as follows: 1373-1376: SGTH → TSRF 1377-1447: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1447 | 1447 | Regulator of G-protein signaling 12 | PRO_0000204213 | ||||||||||||||||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||||||||||||||||
| Domain | 22 – 98 | 77 | PDZ | |||||||||||||||||||||||||||||||||||||||||
| Domain | 228 – 340 | 113 | PID | |||||||||||||||||||||||||||||||||||||||||
| Domain | 715 – 832 | 118 | RGS | |||||||||||||||||||||||||||||||||||||||||
| Domain | 962 – 1032 | 71 | RBD 1 | |||||||||||||||||||||||||||||||||||||||||
| Domain | 1034 – 1104 | 71 | RBD 2 | |||||||||||||||||||||||||||||||||||||||||
| Domain | 1187 – 1209 | 23 | GoLoco | |||||||||||||||||||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||||||||||||||||||
| Cross-link | 1115 | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) Ref.5 | ||||||||||||||||||||||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 1 – 658 | 658 | Missing in isoform 2. | VSP_005682 | ||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 1 – 647 | 647 | Missing in isoform 3. | VSP_005684 | ||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 648 – 666 | 19 | RSFGR…LDDLE → MNLGKELSNETHVSNDQQ in isoform 3. | VSP_005685 | ||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 659 – 666 | 8 | TRSLDDLE → MSLSLFFQ in isoform 2. | VSP_005683 | ||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 1373 – 1376 | 4 | SGTH → TSRF in isoform 4. | VSP_005686 | ||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 1377 – 1447 | 71 | Missing in isoform 4. | VSP_005687 | ||||||||||||||||||||||||||||||||||||||||
| Natural variant | 225 | 1 | I → V. Corresponds to variant rs7679941 [ dbSNP | Ensembl ]. | VAR_034451 | ||||||||||||||||||||||||||||||||||||||||
| Natural variant | 277 | 1 | M → L. Corresponds to variant rs16844152 [ dbSNP | Ensembl ]. | VAR_034452 | ||||||||||||||||||||||||||||||||||||||||
| Natural variant | 1124 | 1 | N → S. Corresponds to variant rs2269497 [ dbSNP | Ensembl ]. | VAR_020208 | ||||||||||||||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 20 – 25 | 6 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 39 – 41 | 3 | ||||||||||||||||||||||||||||||||||||||||||
| Turn | 52 – 56 | 5 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 63 – 67 | 5 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 77 – 84 | 8 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 91 – 96 | 6 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 711 – 714 | 4 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 716 – 721 | 6 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 723 – 735 | 13 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 739 – 753 | 15 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 759 – 773 | 15 | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 774 – 777 | 4 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 786 – 788 | 3 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 790 – 796 | 7 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 802 – 816 | 15 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 818 – 824 | 7 | ||||||||||||||||||||||||||||||||||||||||||
| Helix | 826 – 837 | 12 | ||||||||||||||||||||||||||||||||||||||||||
| Turn | 844 – 846 | 3 | ||||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Novel alternative splicing and nuclear localization of human RGS12 gene products." Chatterjee T.K., Fisher R.A. J. Biol. Chem. 275:29660-29671(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2 AND 3). Tissue: Lung. |
| [2] | "GTPase activating specificity of RGS12 and binding specificity of an alternatively spliced PDZ (PSD-95/Dlg/ZO-1) domain." Snow B.E., Hall R.A., Krumins A.M., Brothers G.M., Bouchard D., Brothers C.A., Chung S., Mangion J., Gilman A.G., Lefkowitz R.J., Siderovski D.P. J. Biol. Chem. 273:17749-17755(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 4). Tissue: Brain. |
| [3] | "Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. Wilson R.K.Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "Tryptic digestion of ubiquitin standards reveals an improved strategy for identifying ubiquitinated proteins by mass spectrometry." Denis N.J., Vasilescu J., Lambert J.-P., Smith J.C., Figeys D. Proteomics 7:868-874(2007) [PubMed] [Europe PMC] [Abstract] Cited for: UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-1115, MASS SPECTROMETRY. Tissue: Mammary cancer. |
| [6] | "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage." Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. Science 316:1160-1166(2007) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Embryonic kidney. |
| [7] | "Solution structure of the RGS domain from human regulator of G-protein signaling 12 (RGS12)." RIKEN structural genomics initiative (RSGI) Submitted (MAR-2008) to the PDB data bank Cited for: STRUCTURE BY NMR OF 705-852. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF030112 mRNA. Translation: AAB84187.1. AF030111 mRNA. Translation: AAB84114.1. AF030110 mRNA. Translation: AAB84007.1. AF030109 mRNA. Translation: AAB84186.1. AF030149 AF030148 Genomic DNA. Translation: AAB96645.1.AF030149 AF030148 Genomic DNA. Translation: AAB96646.1. Sequence problems.AF030149 AF030148 Genomic DNA. Translation: AAB96644.1.AF035152 mRNA. Translation: AAC39835.1. AL645949, AL590235 Genomic DNA. Translation: CAM17750.1. AL645949, AL590235 Genomic DNA. Translation: CAM17751.1. AL645949, AL590235 Genomic DNA. Translation: CAM17752.1. AL590235, AL645949 Genomic DNA. Translation: CAM21452.1. AL590235, AL645949 Genomic DNA. Translation: CAM21453.1. AL590235, AL645949 Genomic DNA. Translation: CAM21454.1. CH471131 Genomic DNA. Translation: EAW82468.1. CH471131 Genomic DNA. Translation: EAW82469.1. CH471131 Genomic DNA. Translation: EAW82470.1. | ||||||||||||||||||
| IPI | IPI00024714. IPI00219104. IPI00219105. IPI00219106. | ||||||||||||||||||
| RefSeq | NP_002917.1. NM_002926.3. NP_937870.1. NM_198227.1. NP_937872.1. NM_198229.2. | ||||||||||||||||||
| UniGene | Hs.527061. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||
| ProteinModelPortal | O14924. | ||||||||||||||||||
| SMR | O14924. Positions 18-100, 705-852, 1025-1118, 1186-1221. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| MINT | MINT-154790. | ||||||||||||||||||
| STRING | 9606.ENSP00000339381. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | O14924. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PaxDb | O14924. | ||||||||||||||||||
| PRIDE | O14924. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| DNASU | 6002. | ||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000336727; ENSP00000338509; ENSG00000159788. ENST00000338806; ENSP00000342133; ENSG00000159788. ENST00000344733; ENSP00000339381; ENSG00000159788. ENST00000382788; ENSP00000372238; ENSG00000159788. | ||||||||||||||||||
| GeneID | 6002. | ||||||||||||||||||
| KEGG | hsa:6002. | ||||||||||||||||||
| UCSC | uc003ggu.2. human. uc003ggv.3. human. uc003ggz.3. human. uc003gha.3. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 6002. | ||||||||||||||||||
| GeneCards | GC04P003253. | ||||||||||||||||||
| H-InvDB | HIX0164019. | ||||||||||||||||||
| HGNC | HGNC:9994. RGS12. | ||||||||||||||||||
| MIM | 602512. gene. | ||||||||||||||||||
| neXtProt | NX_O14924. | ||||||||||||||||||
| PharmGKB | PA34364. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | NOG282424. | ||||||||||||||||||
| HOVERGEN | HBG063299. | ||||||||||||||||||
| InParanoid | O14924. | ||||||||||||||||||
| KO | K16449. | ||||||||||||||||||
| OMA | MVDPELF. | ||||||||||||||||||
| PhylomeDB | O14924. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | O14924. | ||||||||||||||||||
| Bgee | O14924. | ||||||||||||||||||
| CleanEx | HS_RGS12. | ||||||||||||||||||
| Genevestigator | O14924. | ||||||||||||||||||
| GermOnline | ENSG00000159788. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| Gene3D | 1.10.196.10. 1 hit. 2.30.29.30. 1 hit. | ||||||||||||||||||
| InterPro | IPR003109. GoLoco_motif. IPR001478. PDZ. IPR011993. PH_like_dom. IPR006020. PTyr_interaction_dom. IPR003116. Raf-like_ras-bd. IPR000342. Regulat_G_prot_signal. IPR024066. Regulat_G_prot_signal_dom1. IPR016137. Regulat_G_prot_signal_superfam. [Graphical view] | ||||||||||||||||||
| Pfam | PF02188. GoLoco. 1 hit. PF00595. PDZ. 1 hit. PF02196. RBD. 2 hits. PF00615. RGS. 1 hit. [Graphical view] | ||||||||||||||||||
| PRINTS | PR01301. RGSPROTEIN. | ||||||||||||||||||
| SMART | SM00390. GoLoco. 1 hit. SM00228. PDZ. 1 hit. SM00462. PTB. 1 hit. SM00455. RBD. 2 hits. SM00315. RGS. 1 hit. [Graphical view] | ||||||||||||||||||
| SUPFAM | SSF50156. PDZ. 1 hit. SSF48097. Regulat_G_prot_signal_superfam. 1 hit. | ||||||||||||||||||
| PROSITE | PS50877. GOLOCO. 1 hit. PS50106. PDZ. 1 hit. PS01179. PID. 1 hit. PS50898. RBD. 2 hits. PS50132. RGS. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| ChEMBL | CHEMBL1293276. | ||||||||||||||||||
| EvolutionaryTrace | O14924. | ||||||||||||||||||
| GenomeRNAi | 6002. | ||||||||||||||||||
| NextBio | 23405. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | RGS12_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O14924 Secondary accession number(s): B1AQ30 O75338 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 4 Human chromosome 4: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
