O14862 (AIM2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 83.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Interferon-inducible protein AIM2 Alternative name(s): Absent in melanoma 2 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 343 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Tumor suppressor which may act by repressing NF-kappa-B transcriptional activity. Ref.6 Ref.7 |
| Subunit structure | Homodimer. Ref.5 |
| Subcellular location | |
| Tissue specificity | Expressed in spleen, small intestine, peripheral blood leukocytes, and testis. Ref.1 |
| Induction | |
| Miscellaneous | Defects in AIM2 may be a cause of microsatellite unstable colon cancers. |
| Sequence similarities | Belongs to the HIN-200 family. Contains 1 DAPIN domain. Contains 1 HIN-200 domain. |
| Sequence caution | The sequence AAH10940.1 differs from that shown. Reason: Frameshift at position 340. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Nucleus |
| Coding sequence diversity | Polymorphism |
| Disease | Tumor suppressor |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | activation of innate immune response Traceable author statement. Source: Reactome cellular response to drugInferred from direct assay. Source: MGI innate immune responseTraceable author statement. Source: Reactome interleukin-1 beta secretionInferred from mutant phenotype. Source: MGI |
| Cellular component | cytosol Traceable author statement. Source: Reactome mitochondrionInferred from direct assay. Source: HPA nucleusInferred from direct assay. Source: HPA |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 343 | 343 | Interferon-inducible protein AIM2 | PRO_0000153726 | |||||
Regions | |||||||||
| Domain | 1 – 87 | 87 | DAPIN | ||||||
| Domain | 138 – 337 | 200 | HIN-200 | ||||||
| Compositional bias | 206 – 209 | 4 | Poly-Ile | ||||||
Natural variations | |||||||||
| Natural variant | 32 | 1 | E → K. Ref.7 Corresponds to variant rs2276405 [ dbSNP | Ensembl ]. | VAR_022022 | |||||
| Natural variant | 304 | 1 | C → Y. Ref.7 | VAR_043379 | |||||
Experimental info | |||||||||
| Sequence conflict | 253 | 1 | N → D in BAF84731. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning a novel member of the human interferon-inducible gene family associated with control of tumorigenicity in a model of human melanoma." DeYoung K.L., Ray M.E., Su Y.A., Anzick S.L., Johnstone R.W., Trapani J.A., Meltzer P.S., Trent J.M. Oncogene 15:453-457(1997) [PubMed: 9242382] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, INDUCTION BY IFNG. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Spleen. |
| [3] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed: 16710414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [5] | "Biochemical and growth regulatory activities of the HIN-200 family member and putative tumor suppressor protein, AIM2." Cresswell K.S., Clarke C.J.P., Jackson J.T., Darcy P.K., Trapani J.A., Johnstone R.W. Biochem. Biophys. Res. Commun. 326:417-424(2005) [PubMed: 15582594] [Abstract] Cited for: SUBCELLULAR LOCATION, INDUCTION BY IFNG, SUBUNIT. |
| [6] | "AIM2 suppresses human breast cancer cell proliferation in vitro and mammary tumor growth in a mouse model." Chen I.-F., Ou-Yang F., Hung J.-Y., Liu J.-C., Wang H., Wang S.-C., Hou M.-F., Hortobagyi G.N., Hung M.-C. Mol. Cancer Ther. 5:1-7(2006) [PubMed: 16432157] [Abstract] Cited for: FUNCTION. |
| [7] | "The putative tumor suppressor AIM2 is frequently affected by different genetic alterations in microsatellite unstable colon cancers." Woerner S.M., Kloor M., Schwitalle Y., Youmans H., Doeberitz M.K., Gebert J., Dihlmann S. Genes Chromosomes Cancer 46:1080-1089(2007) [PubMed: 17726700] [Abstract] Cited for: ROLE IN COLON CANCER, VARIANTS LYS-32 AND TYR-304. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF024714 mRNA. Translation: AAB81613.1. AK292042 mRNA. Translation: BAF84731.1. AL359753 Genomic DNA. Translation: CAI15088.1. BC010940 mRNA. Translation: AAH10940.1. Frameshift. |
| IPI | IPI00844168. |
| RefSeq | NP_004824.1. NM_004833.1. |
| UniGene | Hs.281898. |
3D structure databases | |
| ProteinModelPortal | O14862. |
| SMR | O14862. Positions 1-92, 152-337. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | O14862. |
Proteomic databases | |
| PRIDE | O14862. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000368130; ENSP00000357112; ENSG00000163568. |
| GeneID | 9447. |
| KEGG | hsa:9447. |
| UCSC | uc001ftj.1. human. |
Organism-specific databases | |
| CTD | 9447. |
| GeneCards | GC01M159032. |
| H-InvDB | HIX0001195. |
| HGNC | HGNC:357. AIM2. |
| HPA | HPA031365. |
| MIM | 604578. gene. |
| neXtProt | NX_O14862. |
| PharmGKB | PA24651. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG06741. |
| HOGENOM | HBG283725. |
| HOVERGEN | HBG006122. |
| OMA | KEFFFVK. |
| OrthoDB | EOG4VQ9PK. |
| PhylomeDB | O14862. |
Enzyme and pathway databases | |
| Reactome | REACT_6900. Immune System. |
Gene expression databases | |
| ArrayExpress | O14862. |
| Bgee | O14862. |
| CleanEx | HS_AIM2. |
| Genevestigator | O14862. |
| GermOnline | ENSG00000163568. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR011029. DEATH-like. IPR004021. HIN200/IF120x. IPR012340. NA-bd_OB-fold. IPR004020. Pyrin. [Graphical view] |
| Gene3D | G3DSA:1.10.533.10. DEATH_like. 1 hit. G3DSA:2.40.50.140. OB_NA_bd_sub. 2 hits. |
| KO | K12966. |
| Pfam | PF02760. HIN. 1 hit. PF02758. PAAD_DAPIN. 1 hit. [Graphical view] |
| SUPFAM | SSF47986. DEATH_like. 1 hit. |
| PROSITE | PS50824. DAPIN. 1 hit. PS50834. HIN_200. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 35388. |
| SOURCE | Search... |
Entry information
| Entry name | AIM2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O14862 Secondary accession number(s): A8K7M7, Q5T3V9, Q96FG9 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with