O14770 (MEIS2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 119.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Homeobox protein Meis2 Alternative name(s): Meis1-related protein 1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 477 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Involved in transcriptional regulation. Binds to HOX or PBX proteins to form dimers, or to a DNA-bound dimer of PBX and HOX proteins and thought to have a role in stabilization of the homeoprotein-DNA complex. Isoform 3/Meis2B is required for the activity of a PDX1:PBX1b:MEIS2b complex in pancreatic acinar cells involved in the transcriptional activation of the ELA1 enhancer; the complex binds to the enhancer B element and cooperates with the transcription factor 1 complex (PTF1) bound to the enhancer A element; MEIS2 is not involved in complex DNA-binding. Probably in complex with PBX1, is involved in transcriptional regulation by KLF4. Isoform 3/Meis2B and isoform 4/Meis2D can bind to a EPHA8 promoter sequence containing the DNA motif 5'-CGGTCA-3'; in cooperation with a PBX protein (such as PBX2) is proposed to be involved in the transcriptional activation of EPHA8 in the developing midbrain. May be involved in regulation of myeloid differentiation. Can bind to the DNA sequence 5'-TGACAG-3'in the activator ACT sequence of the D(1A) dopamine receptor (DRD1) promoter and activate DRD1 transcription; isoform 5/Meis2E cannot activate DRD1 transcription. Ref.1 Ref.7 Ref.11 |
| Subunit structure | Isoform 2/Meis2A interacts with TLX1. Isoform 3/Meis2B interacts with HOXA13 and PBX1 isoform PBX1b. Isoform 4/Meis2D interacts with SP1, SP3 and KLF4. Isoform 4/Meis2D and isoform 5/Meis2E interact with PBX1 isoform PBX1a; the interaction partially relieves MEIS2 autoinhibition. Isoform 3/Meis2B is part of a PDX1:PBX1b:MEIS2b complex; Meis2B is recruited by PBX1b and can be replaced by isoform 4/Meis2D in a small fraction of complexes. Can form trimeric complexes including HOXB8 and PBX2 or PBX3. Ref.9 Ref.10 Ref.11 |
| Subcellular location | Nucleus By similarity. |
| Tissue specificity | Expressed in various tissues. Expressed at high level in the lymphoid organs of hematopoietic tissues. Also expressed in some regions of the brain, such as the putamen. |
| Developmental stage | Expressed in the proliferative zones of the fetal neocortex. Expressed at a very high level in the developing ganglionic eminence and at a more moderate level in the cortical plate. Ref.8 |
| Sequence similarities | Belongs to the TALE/MEIS homeobox family. Contains 1 homeobox DNA-binding domain. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| TLX1 | P31314 | 4 | EBI-6390216,EBI-2820655 |
Alternative products
| This entry describes 8 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: O14770-1) Also known as: Meis2C; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O14770-2) Also known as: Meis2A; The sequence of this isoform differs from the canonical sequence as follows: 384-401: LQSMPGDYVSQGGPMGMS → PMSGMGMNMGMDGQWHYM 402-477: Missing. | ||||||
| Isoform 3 (identifier: O14770-3) Also known as: Meis2B; The sequence of this isoform differs from the canonical sequence as follows: 346-352: Missing. 384-401: LQSMPGDYVSQGGPMGMS → PMSGMGMNMGMDGQWHYM 402-477: Missing. | ||||||
| Isoform 4 (identifier: O14770-4) Also known as: Meis2D; The sequence of this isoform differs from the canonical sequence as follows: 346-352: Missing. | ||||||
| Isoform 5 (identifier: O14770-5) Also known as: Meis2E; The sequence of this isoform differs from the canonical sequence as follows: 301-302: HP → VY 303-477: Missing. | ||||||
| Isoform 6 (identifier: O14770-6) The sequence of this isoform differs from the canonical sequence as follows: 1-89: MAQRYDELPH...IYGHPLFPLL → M 346-352: Missing. 384-401: LQSMPGDYVSQGGPMGMS → PMSGMGMNMGMDGQWHYM 402-477: Missing. | ||||||
| Isoform 7 (identifier: O14770-7) The sequence of this isoform differs from the canonical sequence as follows: 1-13: Missing. 346-352: Missing. 384-401: LQSMPGDYVSQGGPMGMS → PMSGMGMNMGMDGQWHYM 402-477: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 8 (identifier: O14770-8) The sequence of this isoform differs from the canonical sequence as follows: 1-13: Missing. 384-401: LQSMPGDYVSQGGPMGMS → PMSGMGMNMGMDGQWHYM 402-477: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||
Molecule processing | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 477 | 477 | Homeobox protein Meis2 | PRO_0000049108 | ||||||||||||
Regions | ||||||||||||||||
| DNA binding | 276 – 338 | 63 | Homeobox; TALE-type | |||||||||||||
| Region | 71 – 191 | 121 | Required for interaction with PBX1 By similarity | |||||||||||||
| Region | 340 – 477 | 138 | Transcriptional activation domain | |||||||||||||
| Compositional bias | 195 – 244 | 50 | Ser/Thr-rich | |||||||||||||
| Compositional bias | 246 – 273 | 28 | Asp/Glu-rich (acidic) | |||||||||||||
| Compositional bias | 266 – 273 | 8 | Poly-Asp | |||||||||||||
Amino acid modifications | ||||||||||||||||
| Modified residue | 198 | 1 | Phosphoserine By similarity | |||||||||||||
Natural variations | ||||||||||||||||
| Alternative sequence | 1 – 89 | 89 | MAQRY…LFPLL → M in isoform 6. | VSP_043219 | ||||||||||||
| Alternative sequence | 1 – 13 | 13 | Missing in isoform 7 and isoform 8. | VSP_043494 | ||||||||||||
| Alternative sequence | 301 – 302 | 2 | HP → VY in isoform 5. | VSP_002243 | ||||||||||||
| Alternative sequence | 303 – 477 | 175 | Missing in isoform 5. | VSP_002244 | ||||||||||||
| Alternative sequence | 346 – 352 | 7 | Missing in isoform 3, isoform 4, isoform 6 and isoform 7. | VSP_002242 | ||||||||||||
| Alternative sequence | 384 – 401 | 18 | LQSMP…PMGMS → PMSGMGMNMGMDGQWHYM in isoform 2, isoform 3, isoform 6, isoform 7 and isoform 8. | VSP_002245 | ||||||||||||
| Alternative sequence | 402 – 477 | 76 | Missing in isoform 2, isoform 3, isoform 6, isoform 7 and isoform 8. | VSP_002246 | ||||||||||||
Experimental info | ||||||||||||||||
| Mutagenesis | 85 | 1 | L → A: Impairs interaction with PBX1; when associated with A-88. Ref.9 | |||||||||||||
| Mutagenesis | 88 | 1 | L → A: Impairs interaction with PBX1; when associated with A-85. HELIX 285 297. | |||||||||||||
| Mutagenesis | 94 – 97 | 4 | EKCE → NNGT: Impairs interaction with PBX1. Ref.9 | |||||||||||||
| Mutagenesis | 151 | 1 | I → A: Impairs interaction with PBX1; when associated with A-154. Ref.9 | |||||||||||||
| Mutagenesis | 154 | 1 | L → A: Impairs interaction with PBX1; when associated with A-151. Ref.9 | |||||||||||||
| Mutagenesis | 158 – 159 | 2 | LL → AA: Impairs interaction with PBX1; when associated with A-161. | |||||||||||||
| Mutagenesis | 161 | 1 | L → A: Impairs interaction with PBX1; when associated with 158-A-A-159. Ref.9 | |||||||||||||
| Mutagenesis | 332 | 1 | R → M: Impairs DNA binding and PBX1-dependent trasncriptional activation. No effect on interaction with PBX1. Ref.9 Ref.11 | |||||||||||||
Secondary structure | ||||||||||||||||
Helix Strand Turn | ||||||||||||||||
| Helix | 285 – 297 | 13 | ||||||||||||||
| Turn | 298 – 300 | 3 | ||||||||||||||
| Helix | 306 – 316 | 11 | ||||||||||||||
| Helix | 320 – 335 | 16 | ||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Three-amino acid extension loop homeodomain proteins Meis2 and TGIF differentially regulate transcription." Yang Y., Hwang C.K., D'Souza U.M., Lee S.-H., Junn E., Mouradian M.M. J. Biol. Chem. 275:20734-20741(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2; 3; 4 AND 5), FUNCTION. Tissue: Brain. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 6 AND 8). Tissue: Tongue. |
| [3] | "Analysis of the DNA sequence and duplication history of human chromosome 15." Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K., Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N., Abouelleil A. Nusbaum C.Nature 440:671-675(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 4 AND 7). Tissue: Muscle and Testis. |
| [6] | "Chromosomal mapping to 15q14 and expression analysis of the human MEIS2 homeobox gene." Smith J.E. Jr., Afonja O., Yee H.T., Inghirami G., Takeshita K. Mamm. Genome 8:951-952(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 271-477 (ISOFORM 3). |
| [7] | "DNA binding and transcriptional activation by a PDX1.PBX1b.MEIS2b trimer and cooperation with a pancreas-specific basic helix-loop-helix complex." Liu Y., MacDonald R.J., Swift G.H. J. Biol. Chem. 276:17985-17993(2001) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [8] | "Spatiotemporal distribution of PAX6 and MEIS2 expression and total cell numbers in the ganglionic eminence in the early developing human forebrain." Larsen K.B., Lutterodt M.C., Laursen H., Graem N., Pakkenberg B., Mollgard K., Moller M. Dev. Neurosci. 32:149-162(2010) [PubMed] [Europe PMC] [Abstract] Cited for: DEVELOPMENTAL STAGE. |
| [9] | "An autoinhibitory effect of the homothorax domain of Meis2." Hyman-Walsh C., Bjerke G.A., Wotton D. FEBS J. 277:2584-2597(2010) [PubMed] [Europe PMC] [Abstract] Cited for: DOMAIN, INTERACTION WITH PBX1, MUTAGENESIS OF LEU-85; LEU-88; 94-GLU--GLU-97; ILE-151; LEU-154; 158-LEU-LEU-159; LEU-161 AND ARG-332. |
| [10] | "MEIS proteins as partners of the TLX1/HOX11 oncoprotein." Milech N., Gottardo N.G., Ford J., D'Souza D., Greene W.K., Kees U.R., Watt P.M. Leuk. Res. 34:358-363(2010) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH TLX1. |
| [11] | "Cooperative transcriptional activation by Klf4, Meis2, and Pbx1." Bjerke G.A., Hyman-Walsh C., Wotton D. Mol. Cell. Biol. 31:3723-3733(2011) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH SP1; SP3 AND KLF4, MUTAGENESIS OF ARG-332. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF178948 mRNA. Translation: AAF81638.1. AF179896 mRNA. Translation: AAF81639.1. AF179897 mRNA. Translation: AAF81640.1. AF179898 mRNA. Translation: AAF81641.1. AF179899 mRNA. Translation: AAF81642.1. AK056038 mRNA. Translation: BAG51610.1. AK056620 mRNA. Translation: BAG51768.1. AC018563 Genomic DNA. No translation available. AC069483 Genomic DNA. No translation available. AC078909 Genomic DNA. No translation available. CH471125 Genomic DNA. Translation: EAW92353.1. CH471125 Genomic DNA. Translation: EAW92354.1. CH471125 Genomic DNA. Translation: EAW92356.1. BC001516 mRNA. Translation: AAH01516.1. BC001844 mRNA. Translation: AAH01844.3. BC007202 mRNA. Translation: AAH07202.1. BC050431 mRNA. Translation: AAH50431.1. AF017418 mRNA. Translation: AAB70270.1. | ||||||||||||
| IPI | IPI00023696. IPI00171219. IPI00221237. IPI00221238. IPI00746958. | ||||||||||||
| RefSeq | NP_001207411.1. NM_001220482.1. NP_002390.1. NM_002399.3. NP_733774.1. NM_170674.4. NP_733775.1. NM_170675.4. NP_733776.1. NM_170676.4. NP_733777.1. NM_170677.4. NP_758526.1. NM_172315.2. NP_758527.1. NM_172316.2. | ||||||||||||
| UniGene | Hs.510989. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | O14770. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| IntAct | O14770. 3 interactions. | ||||||||||||
| STRING | 9606.ENSP00000326296. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | O14770. | ||||||||||||
Proteomic databases | |||||||||||||
| PaxDb | O14770. | ||||||||||||
| PRIDE | O14770. | ||||||||||||
Protocols and materials databases | |||||||||||||
| DNASU | 4212. | ||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000314177; ENSP00000326296; ENSG00000134138. ENST00000338564; ENSP00000341400; ENSG00000134138. ENST00000340545; ENSP00000339549; ENSG00000134138. ENST00000382766; ENSP00000372216; ENSG00000134138. ENST00000397620; ENSP00000380745; ENSG00000134138. ENST00000397624; ENSP00000380749; ENSG00000134138. ENST00000424352; ENSP00000404185; ENSG00000134138. ENST00000444725; ENSP00000391887; ENSG00000134138. ENST00000559085; ENSP00000453390; ENSG00000134138. ENST00000559561; ENSP00000453497; ENSG00000134138. ENST00000561208; ENSP00000453793; ENSG00000134138. | ||||||||||||
| GeneID | 4212. | ||||||||||||
| KEGG | hsa:4212. | ||||||||||||
| UCSC | uc001zjo.3. human. uc001zjp.3. human. uc001zjr.3. human. uc001zjs.3. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 4212. | ||||||||||||
| GeneCards | GC15M037183. | ||||||||||||
| HGNC | HGNC:7001. MEIS2. | ||||||||||||
| HPA | CAB004999. HPA003256. | ||||||||||||
| MIM | 601740. gene. | ||||||||||||
| neXtProt | NX_O14770. | ||||||||||||
| PharmGKB | PA30741. | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | NOG302919. | ||||||||||||
| HOGENOM | HOG000253923. | ||||||||||||
| HOVERGEN | HBG055193. | ||||||||||||
| InParanoid | O14770. | ||||||||||||
| KO | K16670. | ||||||||||||
| OMA | LHASQHY. | ||||||||||||
| OrthoDB | EOG4XPQFW. | ||||||||||||
| PhylomeDB | O14770. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | O14770. | ||||||||||||
| Bgee | O14770. | ||||||||||||
| CleanEx | HS_MEIS2. | ||||||||||||
| Genevestigator | O14770. | ||||||||||||
| GermOnline | ENSG00000134138. Homo sapiens. | ||||||||||||
Family and domain databases | |||||||||||||
| Gene3D | 1.10.10.60. 1 hit. | ||||||||||||
| InterPro | IPR008422. Homeobox_KN_domain. IPR001356. Homeodomain. IPR009057. Homeodomain-like. [Graphical view] | ||||||||||||
| Pfam | PF05920. Homeobox_KN. 1 hit. [Graphical view] | ||||||||||||
| SMART | SM00389. HOX. 1 hit. [Graphical view] | ||||||||||||
| SUPFAM | SSF46689. Homeodomain_like. 1 hit. | ||||||||||||
| PROSITE | PS00027. HOMEOBOX_1. False negative. PS50071. HOMEOBOX_2. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| ChiTaRS | MEIS2. human. | ||||||||||||
| EvolutionaryTrace | O14770. | ||||||||||||
| GenomeRNAi | 4212. | ||||||||||||
| NextBio | 16594. | ||||||||||||
| SOURCE | Search... | ||||||||||||
Entry information
| Entry name | MEIS2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O14770 Secondary accession number(s): A6NJI5 Q9NRS3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 15 Human chromosome 15: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
