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O14718

- OPSX_HUMAN

UniProt

O14718 - OPSX_HUMAN

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Protein
Visual pigment-like receptor peropsin
Gene
RRH
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

May play a role in rpe physiology either by detecting light directly or by monitoring the concentration of retinoids or other photoreceptor-derived compounds.

GO - Molecular functioni

  1. G-protein coupled receptor activity Source: ProtInc
  2. photoreceptor activity Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

  1. G-protein coupled receptor signaling pathway Source: ProtInc
  2. phototransduction Source: UniProtKB-KW
  3. protein-chromophore linkage Source: UniProtKB-KW
  4. visual perception Source: ProtInc
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Photoreceptor protein, Receptor, Retinal protein, Transducer

Keywords - Biological processi

Keywords - Ligandi

Chromophore

Enzyme and pathway databases

ReactomeiREACT_18426. Opsins.
REACT_19231. G alpha (i) signalling events.

Names & Taxonomyi

Protein namesi
Recommended name:
Visual pigment-like receptor peropsin
Gene namesi
Name:RRH
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 4

Organism-specific databases

HGNCiHGNC:10450. RRH.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 2626Extracellular
Add
BLAST
Transmembranei27 – 4923Helical; Name=1; Reviewed prediction
Add
BLAST
Topological domaini50 – 6112Cytoplasmic
Add
BLAST
Transmembranei62 – 8726Helical; Name=2; Reviewed prediction
Add
BLAST
Topological domaini88 – 10114Extracellular
Add
BLAST
Transmembranei102 – 12120Helical; Name=3; Reviewed prediction
Add
BLAST
Topological domaini122 – 14019Cytoplasmic
Add
BLAST
Transmembranei141 – 16424Helical; Name=4; Reviewed prediction
Add
BLAST
Topological domaini165 – 18824Extracellular
Add
BLAST
Transmembranei189 – 21224Helical; Name=5; Reviewed prediction
Add
BLAST
Topological domaini213 – 24028Cytoplasmic
Add
BLAST
Transmembranei241 – 26424Helical; Name=6; Reviewed prediction
Add
BLAST
Topological domaini265 – 2728Extracellular
Transmembranei273 – 29725Helical; Name=7; Reviewed prediction
Add
BLAST
Topological domaini298 – 33740Cytoplasmic
Add
BLAST

GO - Cellular componenti

  1. integral component of plasma membrane Source: ProtInc
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA34865.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 337337Visual pigment-like receptor peropsin
PRO_0000197819Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi8 – 81N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi98 ↔ 175 Reviewed prediction
Modified residuei284 – 2841N6-(retinylidene)lysine

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiO14718.
PRIDEiO14718.

Expressioni

Tissue specificityi

Found only in the eye, where it is localized to the retinal pigment epithelium (RPE). In the RPE, it is localized to the microvilli that surround the photoreceptor outer segments.

Gene expression databases

BgeeiO14718.
CleanExiHS_RRH.
GenevestigatoriO14718.

Organism-specific databases

HPAiHPA042374.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000314992.

Structurei

3D structure databases

ProteinModelPortaliO14718.
SMRiO14718. Positions 28-311.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG285278.
HOGENOMiHOG000115897.
HOVERGENiHBG098035.
InParanoidiO14718.
KOiK04253.
OMAiAGCQIYA.
OrthoDBiEOG77M8NX.
PhylomeDBiO14718.
TreeFamiTF324998.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR002962. Peropsin.
IPR027430. Retinal_BS.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR01244. PEROPSIN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
PS00238. OPSIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O14718-1 [UniParc]FASTAAdd to Basket

« Hide

MLRNNLGNSS DSKNEDGSVF SQTEHNIVAT YLIMAGMISI ISNIIVLGIF    50
IKYKELRTPT NAIIINLAVT DIGVSSIGYP MSAASDLYGS WKFGYAGCQV 100
YAGLNIFFGM ASIGLLTVVA VDRYLTICLP DVGRRMTTNT YIGLILGAWI 150
NGLFWALMPI IGWASYAPDP TGATCTINWR KNDRSFVSYT MTVIAINFIV 200
PLTVMFYCYY HVTLSIKHHT TSDCTESLNR DWSDQIDVTK MSVIMICMFL 250
VAWSPYSIVC LWASFGDPKK IPPPMAIIAP LFAKSSTFYN PCIYVVANKK 300
FRRAMLAMFK CQTHQTMPVT SILPMDVSQN PLASGRI 337
Length:337
Mass (Da):37,423
Last modified:January 1, 1998 - v1
Checksum:i9DFD8847F07A28EA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF012270 mRNA. Translation: AAC51757.1.
CH471057 Genomic DNA. Translation: EAX06255.1.
BC128120 mRNA. Translation: AAI28121.1.
BC128121 mRNA. Translation: AAI28122.1.
BC128401 mRNA. Translation: AAI28402.1.
BK000958 Genomic DNA. Translation: DAA00976.1.
CCDSiCCDS3687.1.
RefSeqiNP_006574.1. NM_006583.2.
UniGeneiHs.658310.

Genome annotation databases

EnsembliENST00000317735; ENSP00000314992; ENSG00000180245.
GeneIDi10692.
KEGGihsa:10692.
UCSCiuc003hzv.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF012270 mRNA. Translation: AAC51757.1 .
CH471057 Genomic DNA. Translation: EAX06255.1 .
BC128120 mRNA. Translation: AAI28121.1 .
BC128121 mRNA. Translation: AAI28122.1 .
BC128401 mRNA. Translation: AAI28402.1 .
BK000958 Genomic DNA. Translation: DAA00976.1 .
CCDSi CCDS3687.1.
RefSeqi NP_006574.1. NM_006583.2.
UniGenei Hs.658310.

3D structure databases

ProteinModelPortali O14718.
SMRi O14718. Positions 28-311.
ModBasei Search...

Protein-protein interaction databases

STRINGi 9606.ENSP00000314992.

Protein family/group databases

GPCRDBi Search...

Proteomic databases

PaxDbi O14718.
PRIDEi O14718.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000317735 ; ENSP00000314992 ; ENSG00000180245 .
GeneIDi 10692.
KEGGi hsa:10692.
UCSCi uc003hzv.3. human.

Organism-specific databases

CTDi 10692.
GeneCardsi GC04P110749.
HGNCi HGNC:10450. RRH.
HPAi HPA042374.
MIMi 605224. gene.
neXtProti NX_O14718.
PharmGKBi PA34865.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG285278.
HOGENOMi HOG000115897.
HOVERGENi HBG098035.
InParanoidi O14718.
KOi K04253.
OMAi AGCQIYA.
OrthoDBi EOG77M8NX.
PhylomeDBi O14718.
TreeFami TF324998.

Enzyme and pathway databases

Reactomei REACT_18426. Opsins.
REACT_19231. G alpha (i) signalling events.

Miscellaneous databases

GeneWikii RRH.
GenomeRNAii 10692.
NextBioi 40641.
PROi O14718.
SOURCEi Search...

Gene expression databases

Bgeei O14718.
CleanExi HS_RRH.
Genevestigatori O14718.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR002962. Peropsin.
IPR027430. Retinal_BS.
[Graphical view ]
Pfami PF00001. 7tm_1. 1 hit.
[Graphical view ]
PRINTSi PR00237. GPCRRHODOPSN.
PR01244. PEROPSIN.
PROSITEi PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
PS00238. OPSIN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Peropsin, a novel visual pigment-like protein located in the apical microvilli of the retinal pigment epithelium."
    Sun H., Gilbert D.J., Copeland N.G., Jenkins N.A., Nathans J.
    Proc. Natl. Acad. Sci. U.S.A. 94:9893-9898(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Retina.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  4. "In silico characterisation and chromosomal localisation of human RRH (peropsin) -- implications for opsin evolution."
    Bellingham J., Wells D.J., Foster R.G.
    BMC Genomics 4:3-3(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE STRUCTURE.

Entry informationi

Entry nameiOPSX_HUMAN
AccessioniPrimary (citable) accession number: O14718
Secondary accession number(s): A1A4V2, Q7RTS4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: January 1, 1998
Last modified: September 3, 2014
This is version 116 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. Human chromosome 4
    Human chromosome 4: entries, gene names and cross-references to MIM
  3. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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