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Protein

60S ribosomal protein L27-A

Gene

rpl2701

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Miscellaneous

There are two genes for L27 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-SPO-1799339 SRP-dependent cotranslational protein targeting to membrane
R-SPO-72689 Formation of a pool of free 40S subunits
R-SPO-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-SPO-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-SPO-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L27-A
Gene namesi
Name:rpl2701
Synonyms:rpl27a
ORF Names:SPBC685.07c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi

Organism-specific databases

EuPathDBiFungiDB:SPBC685.07c
PomBaseiSPBC685.07c rpl2701

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001260901 – 13660S ribosomal protein L27-AAdd BLAST136

Proteomic databases

MaxQBiO14388
PaxDbiO14388
PRIDEiO14388

PTM databases

iPTMnetiO14388

Interactioni

Protein-protein interaction databases

BioGridi277671, 74 interactors
STRINGi4896.SPBC685.07c.1

Structurei

3D structure databases

SMRiO14388
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000210138
InParanoidiO14388
KOiK02901
OMAiRYPRKVH
OrthoDBiEOG092C5ISN
PhylomeDBiO14388

Family and domain databases

Gene3Di2.30.30.770, 1 hit
InterProiView protein in InterPro
IPR038655 L27e_sf
IPR001141 Ribosomal_L27e
IPR018262 Ribosomal_L27e_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR10497 PTHR10497, 1 hit
PfamiView protein in Pfam
PF01777 Ribosomal_L27e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD009396 Ribosomal_L27e, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
PROSITEiView protein in PROSITE
PS01107 RIBOSOMAL_L27E, 1 hit

Sequencei

Sequence statusi: Complete.

O14388-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKILKPGKV ALITRGRFAG KKVVILQAID QGSKSHPFGH AVVAGVERYP
60 70 80 90 100
LKVTKSMGAK RIARRSRVKP FIKVVNYNHL MPTRYALELD NLKGLITADT
110 120 130
FKEPTQRSAA RKTVKKTFEE KYQSGKSAWF FTPLRF
Length:136
Mass (Da):15,389
Last modified:December 15, 1998 - v2
Checksum:i3D5C1526AD501F72
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti4 – 6ILK → GTR (Ref. 3) Curated3

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA Translation: CAB39364.1
U97385 mRNA Translation: AAB63877.1
AB015354 mRNA Translation: BAA28849.1
PIRiT40638
T43374
RefSeqiNP_596141.1, NM_001022059.2

Genome annotation databases

EnsemblFungiiSPBC685.07c.1; SPBC685.07c.1:pep; SPBC685.07c
GeneIDi2541156
KEGGispo:SPBC685.07c

Entry informationi

Entry nameiRL27A_SCHPO
AccessioniPrimary (citable) accession number: O14388
Secondary accession number(s): O74167
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: December 15, 1998
Last modified: April 25, 2018
This is version 125 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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