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Protein

60S ribosomal protein L27-A

Gene

rpl2701

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Miscellaneous

There are two genes for L27 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L27-A
Gene namesi
Name:rpl2701
Synonyms:rpl27a
ORF Names:SPBC685.07c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC685.07c.
PomBaseiSPBC685.07c. rpl2701.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic large ribosomal subunit Source: PomBase
  • nucleus Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001260901 – 13660S ribosomal protein L27-AAdd BLAST136

Proteomic databases

MaxQBiO14388.
PRIDEiO14388.

Interactioni

Protein-protein interaction databases

BioGridi277671. 74 interactors.
MINTiMINT-4672733.
STRINGi4896.SPBC685.07c.1.

Structurei

3D structure databases

SMRiO14388.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000210138.
InParanoidiO14388.
KOiK02901.
OMAiRYPRKVH.
OrthoDBiEOG092C5ISN.
PhylomeDBiO14388.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiView protein in InterPro
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiView protein in Pfam
PF01777. Ribosomal_L27e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD009396. Ribosomal_L27e. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiView protein in PROSITE
PS01107. RIBOSOMAL_L27E. 1 hit.

Sequencei

Sequence statusi: Complete.

O14388-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKILKPGKV ALITRGRFAG KKVVILQAID QGSKSHPFGH AVVAGVERYP
60 70 80 90 100
LKVTKSMGAK RIARRSRVKP FIKVVNYNHL MPTRYALELD NLKGLITADT
110 120 130
FKEPTQRSAA RKTVKKTFEE KYQSGKSAWF FTPLRF
Length:136
Mass (Da):15,389
Last modified:December 15, 1998 - v2
Checksum:i3D5C1526AD501F72
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti4 – 6ILK → GTR (Ref. 3) Curated3

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAB39364.1.
U97385 mRNA. Translation: AAB63877.1.
AB015354 mRNA. Translation: BAA28849.1.
PIRiT40638.
T43374.
RefSeqiNP_596141.1. NM_001022059.2.

Genome annotation databases

EnsemblFungiiSPBC685.07c.1; SPBC685.07c.1:pep; SPBC685.07c.
GeneIDi2541156.
KEGGispo:SPBC685.07c.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL27A_SCHPO
AccessioniPrimary (citable) accession number: O14388
Secondary accession number(s): O74167
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: December 15, 1998
Last modified: July 5, 2017
This is version 120 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families