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Protein

Negative cofactor 2 complex subunit beta

Gene

ncb2

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Negative cofactor 2 complex subunit beta
Short name:
NC2 complex subunit beta
Gene namesi
Name:ncb2
ORF Names:SPBC30D10.02
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC30D10.02.
PomBaseiSPBC30D10.02. ncb2.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • nuclear chromatin Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003170901 – 161Negative cofactor 2 complex subunit betaAdd BLAST161

Proteomic databases

MaxQBiO14348.
PRIDEiO14348.

Interactioni

Protein-protein interaction databases

BioGridi276934. 7 interactors.
MINTiMINT-4672509.

Structurei

3D structure databases

ProteinModelPortaliO14348.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NC2 beta/DR1 family.Curated
Contains 1 histone-fold domain.Curated

Phylogenomic databases

HOGENOMiHOG000178641.
InParanoidiO14348.
OMAiEICNKSD.
OrthoDBiEOG092C5BSS.
PhylomeDBiO14348.

Family and domain databases

Gene3Di1.10.20.10. 1 hit.
InterProiIPR003958. CBFA_NFYB_domain.
IPR009072. Histone-fold.
[Graphical view]
PfamiPF00808. CBFD_NFYB_HMF. 1 hit.
[Graphical view]
SUPFAMiSSF47113. SSF47113. 1 hit.

Sequencei

Sequence statusi: Complete.

O14348-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDGFADDEL SLPKATVQKM VSDILPVDLT FTKEARDLLI ECCVEFIHLV
60 70 80 90 100
SSEANEICEK EAKKTIAAEH IIKALENLEF KEYIAEALEV AAEHKEQQKN
110 120 130 140 150
REKKSSKFEQ SGVSRDELLR QQEELLSRAR ERFKNQNIAH DNHTTTAIPV
160
PTASETETKE N
Length:161
Mass (Da):18,327
Last modified:January 1, 1998 - v1
Checksum:i5E69F880B909FA9E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAB10797.1.
PIRiT40194.
RefSeqiNP_596283.1. NM_001022204.2.

Genome annotation databases

EnsemblFungiiSPBC30D10.02.1; SPBC30D10.02.1:pep; SPBC30D10.02.
GeneIDi2540406.
KEGGispo:SPBC30D10.02.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAB10797.1.
PIRiT40194.
RefSeqiNP_596283.1. NM_001022204.2.

3D structure databases

ProteinModelPortaliO14348.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276934. 7 interactors.
MINTiMINT-4672509.

Proteomic databases

MaxQBiO14348.
PRIDEiO14348.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC30D10.02.1; SPBC30D10.02.1:pep; SPBC30D10.02.
GeneIDi2540406.
KEGGispo:SPBC30D10.02.

Organism-specific databases

EuPathDBiFungiDB:SPBC30D10.02.
PomBaseiSPBC30D10.02. ncb2.

Phylogenomic databases

HOGENOMiHOG000178641.
InParanoidiO14348.
OMAiEICNKSD.
OrthoDBiEOG092C5BSS.
PhylomeDBiO14348.

Miscellaneous databases

PROiO14348.

Family and domain databases

Gene3Di1.10.20.10. 1 hit.
InterProiIPR003958. CBFA_NFYB_domain.
IPR009072. Histone-fold.
[Graphical view]
PfamiPF00808. CBFD_NFYB_HMF. 1 hit.
[Graphical view]
SUPFAMiSSF47113. SSF47113. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiNC2B_SCHPO
AccessioniPrimary (citable) accession number: O14348
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: January 1, 1998
Last modified: November 30, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.