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O14301 (YE85_SCHPO) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized WD repeat-containing protein C9G1.05
Gene names
ORF Names:SPAC9G1.05
OrganismSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) [Reference proteome]
Taxonomic identifier284812 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces ›

Protein attributes

Sequence length595 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the WD repeat AIP1 family.

Contains 11 WD repeats.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 595595Uncharacterized WD repeat-containing protein C9G1.05
PRO_0000051495

Regions

Repeat56 – 9540WD 1
Repeat100 – 14344WD 2
Repeat144 – 18441WD 3
Repeat187 – 22640WD 4
Repeat229 – 26840WD 5
Repeat313 – 35240WD 6
Repeat356 – 39338WD 7
Repeat433 – 47240WD 8
Repeat477 – 51640WD 9
Repeat520 – 55940WD 10
Repeat564 – 59431WD 11

Sequences

Sequence LengthMass (Da)Tools
O14301 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 4F9B4FAF32823ECE

FASTA59565,266
        10         20         30         40         50         60 
MSSQLKSTWA PVPSTKPSQP CKIGTDFKGE RIVYPANKAI IIREIEKQEN CFQYNEHTAP 

        70         80         90        100        110        120 
TTVARFSPSG YYVASGDNQG NVRIWDCAGE DKILKNQVTA ISGRITDLDW DGDSQRIIAV 

       130        140        150        160        170        180 
GEGKERYGHA FTADSGNSVG EIFGHSSVVN AVSLRKSRPF RAATASDDNS INFFHGTPYR 

       190        200        210        220        230        240 
FNRSLRVHSK FVYDVRYSPN DERFASAGAD GKVYVFDGKT GDQVYEIDAH KGSIFSISWS 

       250        260        270        280        290        300 
PDSSQFVTSS AGYSCKIWDA NTGSLIREWL SSDKKQLVGT VWPTKDLIIV VNSKGNLTYL 

       310        320        330        340        350        360 
NPSDCKVIDT IYGHQRSITA ATLSPDATHF YTASYDGTVL SWDIGKQKAF PLVGESHTNQ 

       370        380        390        400        410        420 
VMQMIMADDH VITIGMDDTL RVIDIKQGCF AKDNVFPTGY QPIGVCSVED CLILVTVSDI 

       430        440        450        460        470        480 
QVLRSLTGVS TAKTIYQPSA VASHPLKSEF CVGGEDCCVY IHTLEKGELC EVAQCKDSTA 

       490        500        510        520        530        540 
PITCLAYSPD GKYLACGDAS GKVVLYDANS REVITSRWAF HTGRILGMSW NAKSTHLATA 

       550        560        570        580        590 
SLDTNIHIYS VERPMKYIAM KNAHSLGATQ VEWVSENELL STGSDAAIKV WSVTF

« Hide

References

[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 972 / ATCC 24843.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU329670 Genomic DNA. Translation: CAB11489.1.
PIRT39228.
RefSeqNP_593560.1. NM_001018993.2.

3D structure databases

ProteinModelPortalO14301.
ModBaseSearch...

Protein-protein interaction databases

IntActO14301. 1 interaction.
STRING4896.SPAC9G1.05-1.

Proteomic databases

PaxDbO14301.
PRIDEO14301.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiSPAC9G1.05.1; SPAC9G1.05.1:pep; SPAC9G1.05.
GeneID2542795.
KEGGspo:SPAC9G1.05.

Organism-specific databases

PomBaseSPAC9G1.05.

Phylogenomic databases

eggNOGCOG2319.
HOGENOMHOG000162559.
OMALKDQKKC.
OrthoDBEOG4P5PJ9.

Family and domain databases

Gene3D2.130.10.10. 2 hits.
InterProIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF00400. WD40. 6 hits.
[Graphical view]
SMARTSM00320. WD40. 10 hits.
[Graphical view]
SUPFAMSSF50978. WD40_like. 2 hits.
PROSITEPS00678. WD_REPEATS_1. False negative.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20803838.

Entry information

Entry nameYE85_SCHPO
AccessionPrimary (citable) accession number: O14301
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: January 1, 1998
Last modified: April 3, 2013
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents